Medtronic, Inc. & Consolidated Subsidiaries ( 2022 )


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  •                     United States Tax Court
    
    T.C. Memo. 2022-84
    MEDTRONIC, INC. AND CONSOLIDATED SUBSIDIARIES,
    Petitioner
    v.
    COMMISSIONER OF INTERNAL REVENUE,
    Respondent 1
    —————
    Docket No. 6944-11.                                       Filed August 18, 2022.
    —————
    Andrew D. Allen, David J. Berke, Melinda Gammello, Thomas V.
    Linguanti, Rajiv Madan, and Jaclyn M. Roeing, for petitioner.
    John Edward Budde, Paul L. Darcy, Laurie B. Downs, Elizabeth P.
    Flores, Jill A. Frisch, Jeannette D. Pappas, and H. Barton Thomas, for
    respondent.
    SUPPLEMENTAL MEMORANDUM
    FINDINGS OF FACT AND OPINION
    KERRIGAN, Chief Judge: This matter is before the Court on
    remand from the U.S. Court of Appeals for the Eighth Circuit for further
    consideration consistent with its opinion in Medtronic II, 
    900 F.3d 610
    .
    The Eighth Circuit remanded the case for further consideration in the
    light of the views set forth in its opinion. See id. at 615. The Eighth
    Circuit stated: “The [T]ax [C]ourt determined that the Pacesetter
    agreement was an appropriate [comparable uncontrolled transaction
    (CUT)] because it involved similar intangible property and had similar
    circumstances regarding licensing. We conclude that the [T]ax [C]ourt’s
    1 This Opinion supplements our previous Opinion Medtronic, Inc. & Consol.
    Subs. v. Commissioner (Medtronic I), 
    T.C. Memo. 2016-112
    , vacated and remanded,
    Medtronic, Inc. & Consol. Subs. v. Commissioner (Medtronic II), 
    900 F.3d 610
     (8th Cir.
    2018).
    Served 08/18/22
    2
    [*2] factual findings are insufficient to enable us to conduct an
    evaluation of that determination.” Id. at 614.
    The Eighth Circuit stated that we did not provide (1) sufficient
    detail as to whether the circumstances between Siemens Pacesetter, Inc.
    (Pacesetter), and Medtronic US were comparable to the licensing
    agreement between Medtronic US and Medtronic Puerto Rico (MPROC)
    and whether the Pacesetter agreement was one created in the ordinary
    course of business; (2) an analysis of the degree of comparability of the
    Pacesetter agreement’s contractual terms and those of the MPROC’s
    licensing agreement; (3) an evaluation of how the different treatment of
    intangibles affected the comparability of the Pacesetter agreement and
    the MPROC licensing agreement; and (4) the amount of risk and product
    liability expense that should be allocated between Medtronic US and
    MPROC. See id. at 614–15. The Eighth Circuit “deem[s] such findings
    to be essential to [its] review of the [T]ax [C]ourt’s determination that
    the Pacesetter agreement was a CUT, as well as necessary to [its]
    determination whether the [T]ax [C]ourt applied the best transfer
    pricing method for calculating an arm’s length result or whether it made
    proper adjustments under its chosen method.” Id. at 615.
    The parties agreed that the record did not need to be reopened
    with respect to the amount of risk and product liability expense that
    should be allocated between Medtronic US and MPROC because the
    record is already sufficient to make additional factual findings on that
    issue. Pursuant to the Court’s May 3, 2019, Order, further trial was
    scheduled for expert testimony to address:
    (1) whether the Pacesetter agreement is a CUT;
    (2) whether this Court made appropriate adjustments to
    the Pacesetter agreement as a CUT;
    (3) whether the circumstances between Pacesetter and
    Medtronic US were comparable to the licensing
    agreement between Medtronic and [MPROC] and
    whether the Pacesetter agreement was an agreement
    created in the ordinary course of business;
    (4) an analysis of the degree of comparability of the
    Pacesetter agreement’s contractual terms and those of
    the [MPROC] licensing agreement;
    3
    [*3]   (5) an evaluation of how the different intangibles affected
    the comparability of the Pacesetter agreement and the
    [MPROC] licensing agreement;
    (6) an analysis that contrasts and compares the CUT
    method using the Pacesetter agreement with or without
    adjustments and the [comparable profits method
    (CPM)], including which method is the best method.
    See Medtronic II, 900 F.3d at 614–15.
    Respondent determined deficiencies as amended by Answer in
    petitioner’s federal income tax of $548,180,115 and $810,301,695 for
    2005 and 2006 (years in issue), respectively. Unless otherwise
    indicated, all statutory references are to the Internal Revenue Code,
    Title 26 U.S.C. (Code), in effect at all relevant times, all regulation
    references are to the Code of Federal Regulations, Title 26 (Treas. Reg.),
    in effect at all relevant times, and all Rule references are to the Tax
    Court Rules of Practice and Procedure. We round all monetary amounts
    to the nearest dollar.
    We held in Medtronic I that the CUT method was the best method
    for determining the arm’s-length rate. Medtronic I, at *138. We
    concluded that a reasonable wholesale royalty rate for the devices is
    44%, a reasonable wholesale royalty rate for the leads is 22%, and the
    wholesale royalty rate for devices should be 44% for the Swiss supply
    agreement. Id. at *137–39.
    The issues for our consideration are (1) whether the CUT method
    is the best method for determining the arm’s-length rate, (2) what the
    proper royalty rates are for the devices and the leads, and (3) what the
    proper royalty rate is for devices sold pursuant to the Swiss supply
    agreement.
    After analyzing the above issues, we conclude that petitioner has
    not met its burden to show that its allocation under the CUT method
    and its proposed unspecified method satisfy the arm’s-length standard.
    We further conclude that respondent’s modified CPM results in an abuse
    of discretion and that the wholesale royalty rate for devices and leads is
    48.8%. Accordingly, the wholesale royalty rate for devices covered by
    the Swiss Supply Agreement is 48.8%.
    4
    [*4]                     FINDINGS OF FACT
    On January 22, 2015, the Court issued a protective order which
    has been amended and extended to prevent the disclosure of petitioner’s
    proprietary and confidential information. The facts and opinion have
    been adapted accordingly, and any information set forth herein is not
    proprietary or confidential.
    Medtronic US is a Minnesota corporation with its principal place
    of business in Minneapolis, Minnesota. During 2005 and 2006
    Medtronic US was the parent corporation of a group of consolidated
    corporations and multinational affiliated subsidiaries (collectively,
    petitioner).
    Facts of this case were found in our original Opinion, Medtronic I,
    and are incorporated by this reference. We summarize, clarify, and add
    to the facts to address the holding in Medtronic II.
    I.     Overview of Petitioner
    Since the early 1960s petitioner has been a leading medical
    technology company with operations and sales worldwide. By 2005
    petitioner operated in more than 120 countries and had approximately
    33,000 employees worldwide. During 2005 and 2006 petitioner operated
    through multiple business units; this case, however, involves only the
    Cardiac Rhythm Disease Management (CRDM) and Neurological
    (Neuro) business units. During the years in issue CRDM had more
    employees and substantially more revenue than Neuro. Both business
    units had devices and leads that are at issue in this case. The device
    operations across both business units were larger and earned more
    revenues than the leads operations.        Medtronic maintained its
    operations in Puerto Rico through MPROC.
    A.    Medtronic Puerto Rico
    MPROC has been manufacturing class III implantable medical
    devices for sale in the United States and around the world for nearly 50
    years. For the past almost 20 years, it has been conducting its
    operations under licenses from its parent, Medtronic US.
    MPROC manufactures devices and leads, both of which are life-
    saving or life-sustaining class III medical devices, as defined and
    determined by the Food and Drug Administration (FDA). Medtronic US
    and MPROC entered into license agreements under which MPROC
    5
    [*5] obtained the right to use, develop, and enjoy the intangible property
    for manufacturing devices for sale to customers in the United States and
    its territories and possessions and leads for sale to customers worldwide.
    MPROC’s device and leads operations were FDA-registered
    facilities subject to regular pre-market and post-market inspection by
    the FDA, as well as by international regulatory agencies, and were
    solely responsible for manufacturing the products ultimately implanted
    in patients. MPROC was involved in every aspect of the manufacturing
    processes for devices and leads. It was solely responsible for ensuring
    that the final manufactured devices and leads met the required
    specifications and for determining whether a device or lead met the
    applicable regulatory standards and whether it was ready for
    implantation in the human body. MPROC had the responsibility of
    inspecting and handling the finished devices or leads and ensuring that
    all components were properly combined so that the device could provide
    the patient therapy repeatedly and reliably.
    The process to make devices and leads was very detailed. It
    required skilled workers. MPROC would fire an employee if a defect
    could be traced back to that employee’s work, even if it was the
    employee’s first mistake. MPROC tested and sterilized finished devices
    and leads. As Medtronic’s senior vice president of medicine and
    technology testified convincingly: “You can have all the essentially great
    parts you want, but the critical stuff is in the systems engineering.
    Those things put it together and manufacture it reliably at scale. It’s
    crucial. You don’t do that you have no product.”
    The manufacturing processes for both devices and leads takes a
    week or longer.      The products are made in an FDA-regulated
    “cleanroom” environment. Some processes cannot be done automatically
    and require skilled workers to complete them by hand.
    MPROC was not only concerned with being able to produce
    products at a high volume, it was also concerned that each product be
    made with the highest quality and be able to be placed inside a patient.
    It was difficult to manufacture sensitive medical equipment at a high
    volume and maintain quality. MPROC employees would participate in
    core teams where they would partner with Medtronic US through each
    development phase of new products to ensure that newly developed
    products were manufacturable at commercial scale. The bottom line
    was that if a finished product cannot be made, it cannot be sold.
    6
    [*6]   B.    Med USA
    Med USA is a Minnesota corporation with its principal place of
    business in Minneapolis, Minnesota. Med USA was a member of
    Medtronic US’s consolidated group. During 2005 and 2006 MPROC sold
    devices and leads to Med USA for sale in the United States and other
    jurisdictions. Med USA’s CRDM and Neuro sales organizations were
    responsible for building relationships with and selling products to
    customers, including physicians; developing their respective markets by
    educating physicians and patients; delivering products to customers for
    use in surgery; and providing assistance to physicians and patients
    before, during, and after surgery. Med USA’s sales representatives were
    not medical professionals; rather, they played a support role in surgery
    by providing technical support for devices and leads to implanting
    physicians as needed.
    During the years in issue the CRDM sales organization consisted
    of approximately 2,000 sales representatives, and the Neuro sales
    organization consisted of approximately 200 to 300 sales
    representatives. Sales staff received base pay and commissions.
    C.    Class III Medical Devices
    In order for certain medical devices to be legally marketed in the
    United States, they must be FDA approved. The FDA requires all
    manufacturers of medical devices distributed in the United States to
    register their facilities, list their medical devices, and follow certain
    requirements. The FDA classifies medical devices according to the risks
    that they pose to consumers. The Medical Device Amendments of 1976
    to the Federal Food, Drug, and Cosmetic Act classified medical devices
    that were on the market at the time into one of three classes: class I,
    class II, and class III. Medical Device Amendments of 1976, Pub. L. No.
    94-295, § 2, 
    90 Stat. 539
    , 540 (codified as amended at 21 U.S.C. 360c).
    Class I medical devices are subject to the fewest regulatory controls, and
    class III medical devices are subject to the most stringent controls. Class
    III medical devices must comply with certain controls and go through a
    premarket approval (PMA) process. The PMA process is lengthy and
    can often take five to ten years. Class III medical devices are higher risk
    and more novel than are those of classes I and II.
    Medical devices are categorized as class III if there is insufficient
    information that existing controls applicable to classes I and II devices
    are sufficient to provide reasonable assurance of safety and effectiveness
    7
    [*7] and the devices are “purported or represented to be for a use in
    supporting or sustaining human life or for a use which is of substantial
    importance in preventing impairment of human health.” 21 U.S.C.
    360c(a)(1)(A)(ii)(II). Class III medical devices require more scrutiny
    than class I or class II devices. Class III medical devices include those
    which are life supporting or life sustaining, such as implanted cerebellar
    stimulators, heart valves, and certain dental implants. Examples of
    class I medical devices are elastic bandages and examination gloves.
    Examples of class II medical devices are powered wheelchairs and
    infusion pumps.
    Class III medical devices must typically be FDA approved before
    they are marketed through the PMA process, which is rigorous, costly,
    and time consuming. The PMA requires a demonstration that the new
    medical device is safe and effective. That demonstration is performed
    by collecting data, including human clinical data, for the medical device.
    The class III medical devices primarily at issue in this case are
    devices and leads. The devices and leads are developed, manufactured,
    marketed, and sold through Medtronic’s CRDM and Neuro business
    segments, which are described in greater detail below.
    D.     CRDM and Neuro Business Units
    1.     CRDM
    During 2005 and 2006 Medtronic’s CRDM unit was the world’s
    leading seller of cardiac rhythm stimulation devices. Medtronic’s CRDM
    business focused on managing the entire spectrum of cardiac rhythm
    disorders to improve long-term patient care through products that
    restore and regulate a patient’s heart rhythm and improve the heart’s
    pumping function. Its products were devices, leads, and the associated
    delivery systems for the devices.
    a.    Manufacturing
    In general cardio devices have three primary components:
    implantable pulse generators (IPGs), leads, and programmers. IPGs are
    battery-powered computer-based devices that continually monitor the
    heart, analyze cardiac signals, and apply therapeutic actions based on
    their programming algorithms. Leads are flexible sets of wire that
    connect the IPGs to the heart. Leads connect at one end to the heart
    and at the other end to the IPG. Programmers are external devices that
    communicate through the skin to the IPG to obtain information from the
    8
    [*8] IPG regarding its activities. Programmers were manufactured by
    an outside vendor and are not relevant to this case.
    b.    Devices
    CRDM device products consisted primarily of bradycardia
    pacemakers, also known as IPGs; tachyarrhythmia (tachy) devices, also
    known as implantable cardioverter defibrillators (ICDs); and cardiac
    resynchronization therapy (CRT) devices. IPGs treat abnormally slow
    heart rates. ICDs treat abnormally fast heart rates. ICDs also have
    capacitors as components. CRTs treat insufficient blood flow and
    uncoordinated pumping of the heart’s chambers.
    During 2005 and 2006 the device operations at MPROC built
    more than 40 different models of devices and approximately 250,000 to
    280,000 devices per year; it was the primary or sole manufacturer of
    most models of devices sold in the United States. The 40 different
    models of devices comprised approximately 750 individual components.
    MPROC’s device operations made complex pieces of electronic
    machinery that are extremely difficult to manufacture. The process was
    labor and capital intensive and time consuming and required numerous
    quality checks. Manufacturing a device was a multistep process that
    involved approximately 40 steps. Depending on the complexity of the
    particular device, manufacturing could take 7 to 14 days to build a single
    device.
    While the device operations used automated processes to
    manufacture devices, MPROC relied on its employees to verify those
    automated processes, to perform multiple quality inspections
    throughout each manufacturing stage, to complete significant portions
    of the process manually, and to oversee and troubleshoot all
    manufacturing processes generally.      Highly trained and skilled
    operators oversaw all manufacturing processes.
    MPROC needed to use extreme care to interconnect the various
    components of a device, ensure that it was hermetically sealed, and
    sterilize it. With regard to the interconnect welding step of the device
    manufacturing process, for example, operators had to painstakingly
    inspect the welding that took place at each and every preceding step of
    the device manufacturing process for any discoloration or damage.
    Because of the stringent quality standards that class III finished devices
    must meet, the device operations maintained a detailed traceability
    system of each step of the manufacturing process in the event that it
    9
    [*9] needed to trace a quality issue to its source in the manufacturing
    process.
    c.      Leads
    CRDM products included leads, which are highly complex
    “wiring” systems that connect devices to the human body and deliver
    therapies. Leads are the devices that transmit therapies from a device
    to the heart via electrical signals and information about the heart’s
    activity from the heart to the device. Leads are thin wires that are
    insulated with silicone or polyurethane and are implanted into the right
    atrium, right ventricle, or left ventricle of the heart.
    Because CRDM leads are implanted in a patient’s heart,
    removing a lead because of a product quality defect can be an extremely
    difficult procedure. After implant, fibrous tissue forms around the lead,
    around the nearby blood vessels, and within the heart. Leads were not
    designed to be extracted from the human body. When a product quality
    problem occurs, the physician and the patient must determine whether
    to leave the lead in the patient’s body or, if the severity of the problem
    requires it, or the patient demands it, to remove the lead through an
    “extraction” procedure. In the case of CRDM leads, an extraction was
    the riskiest procedure an electrophysiologist could perform on a patient.
    On average, there was a 1% chance that during an extraction, the
    procedure would tear a major vessel or create a hole in the patient’s
    heart, which can be fatal.
    2.     Neuro
    Medtronic’s     Neuro      business      included      implantable
    neurostimulation devices (neuro devices) and leads that delivered
    electrical stimulation from neuro devices to the spinal cord, nervous
    system, or brain. The devices and leads delivered drugs or electrical
    stimulation to the spinal cord, brain, or other parts of the nervous
    system to treat pain, movement disorders, and other disorders,
    including Parkinson’s disease, essential tremor, chronic pain, and
    spasticity. Neuro devices included battery-operated generators; leads
    that connect the generators to the spinal cord, brain, or nervous system;
    and programmers to communicate with the generators or recharge the
    batteries.
    Neuro’s products were often used to treat chronic back and leg
    pain, complex regional pain, and neuropathy through spinal cord
    stimulation therapy. In spinal cord stimulation therapy, neuro leads
    10
    [*10] are attached to specific parts of the spinal cord. The therapy
    functions by blocking pain messages to the brain with electrical
    impulses to the epidural space near the spinal cord.
    Neuro’s products used in deep brain stimulation safely and
    effectively manage some of the most disabling movement disorders, such
    as Parkinson’s disease, essential tremor, and dystonia. Leads are placed
    in targeted areas of the brain, and the amount of electrical stimulation
    is adjusted to meet the patient’s needs. Neurosurgeons, neurologists,
    pain management specialists, and orthopedic spine surgeons commonly
    use these products.
    a.     Manufacturing
    The manufacturing process for Neuro’s devices and leads was
    similar to the process for CRDM. Changes in the processes were due to
    different specifications of the products.
    b.     Devices
    Neuro’s devices were made in the Juncos facility in Puerto Rico.
    The process was very similar to the process for CRDM’s devices, but the
    specifications and applications of Neuro’s devices were different from
    those of CRDM’s devices.
    c.     Leads
    The production of leads was extremely complicated and labor
    intensive. Leads manufacturing was an almost completely manual
    process, performed within tight tolerances, requiring skilled labor to join
    raw material with lasers and adhesives. It could take up to several
    weeks to manufacture a single lead, and there could be over 100 steps
    in the manufacturing process. Each manufacturing step began with a
    review of the quality of the work performed in the prior step. The
    manufacturing process for even the subassembly of a single portion of a
    lead, such as the outer assembly of the lead, comprised approximately
    20 steps. In addition to interim quality reviews, there were as many as
    50 quality tests throughout the leads manufacturing process, depending
    on the complexity of the particular lead. The leads operations
    maintained a detailed traceability system of each step of the
    manufacturing process in the event that it needed to trace a quality
    issue back to its source.
    11
    [*11] MPROC’s leads operations were responsible for specifying,
    purchasing, validating, and installing the equipment that it needed to
    manufacture leads. Neuro leads did not use any components from the
    Medtronic Microelectronics Center or the Medtronic Energy &
    Component Center. Some equipment used in manufacturing leads was
    custom designed to specifications established by the leads operations
    and built specifically for the leads operations. New equipment was
    subject to testing and required approval, not only from Medtronic, but
    also from the FDA and other regulatory agencies, before the equipment
    could be used in the manufacturing process.
    E.     Competitors
    CRDM’s primary competitors were Guidant Corp. (Guidant),
    Boston Scientific Corp. (Boston Scientific) (after acquiring Guidant), and
    St. Jude Medical, Inc. (St. Jude). From the late 1990s through 2005 and
    2006 the CRDM market was dominated by Medtronic, and then Guidant
    and St. Jude, with only minor other players. Neuro’s primary
    competitors were Johnson & Johnson, Boston Scientific, Advanced
    Neuromodulation Systems, Inc. (Advanced Neuro), St. Jude (after its
    acquisition of Advanced Neuro) and Stryker Corp. (Stryker). Medtronic
    had the largest share of the U.S. market for neuro spinal cord
    stimulators and had no competitors in the United States for neuro deep
    brain stimulators.
    F.     Self Insurance
    The threats of class-action lawsuits or multidistrict proceedings
    are frequent consequences of product recalls in the medical device
    industry. The type of insurance coverage that Medtronic needed to
    insure itself fully against its product liability risk, namely “catastrophic
    insurance” on the order of billions of dollars, was not available in the
    marketplace during the years in issue. Since 2002 Medtronic has been
    unable to obtain product liability insurance to insure against losses at
    commercially acceptable premium amounts.
    Thus, Medtronic self-insured against product liability risk,
    effective May 1, 2002, as well as during 2005 and 2006. The decision to
    self-insure increased the level of scrutiny placed on quality. Once
    Medtronic made the decision to self-insure against product liability risk
    and no longer had any other kind of insurance to pay for losses
    associated with product quality, it was even more important that the
    finished product function properly.
    12
    [*12] Medtronic’s business and legal groups were responsible for
    identifying and resolving customer complaints regarding product
    problems as early as possible. Because Medtronic was self-insured
    during 2005 and 2006, its claim management process was intended to
    minimize the risk of product liability litigation.
    II.   MPROC Agreement
    Medtronic US and Med USA entered into various agreements and
    amendments with MPROC that were effective during 2005 and 2006.
    Medtronic US and MPROC entered into license agreements, effective as
    of September 30, 2001, for the intangible property used in
    manufacturing devices (devices license, as amended over the years) and
    leads (leads license, as amended over the years) (jointly, devices and
    leads licenses). The devices license was for products in the following
    businesses: bradycardia pacing, tachy management, and neurological
    stimulation. The leads license was for products that include medical
    therapy delivery devices, which include electrode leads for implantable
    pulse generators and implantable cardioverter defibrillators, and
    neurostimulation electrode leads.
    The MPROC agreement provided MPROC with an exclusive
    license to use Medtronic US’s patents and Medtronic US’s portfolio of
    technology implantables. The total number of patents made available
    to MPROC under the MPROC agreement exceeded 1,600 by May 2004
    and topped 1,800 through April 2006.
    Under the terms of the MPROC agreement, each party was
    required to disclose and share all know-how and product improvements
    with the other. If terminated, the MPROC agreement barred MPROC
    from using or disclosing any confidential know-how or other information
    received from Medtronic US for six years unless the information was
    public or was documented by MPROC before the agreement began. The
    2005 MPROC agreement had a one-year term, and the 2006 MPROC
    agreement had a three-year term.
    Under the devices and leads licenses, MPROC obtained the
    exclusive right to use, develop, and enjoy, not only Medtronic US’s
    patents, but also the full array of intangible property necessary in
    manufacturing devices for sale to customers in the United States and its
    territories and possessions, and leads for sale to customers worldwide.
    The devices and leads licenses both define intangible property for
    any product as:
    13
    [*13] Section 1.4. Intangible Property
    “Intangible Property” shall mean Licensor developed
    inventions, secret processes, technical information, and
    technical expertise relating to the design of Product and all
    legal rights associated therewith, including without
    limitation, patents, trade secrets, know-how, copyrights
    and all Regulatory Approvals associated with Product.
    As specified in the devices and leads agreements, intangible
    property included know-how, which the agreements both defined as:
    Section 1.5. Know-How
    “Know-How” shall mean any and all technical information
    presently available or generated during the term of this
    Agreement that relates to Product or Improvements and
    shall include, without limitation, all manufacturing data
    and any other information relating to Product or
    Improvements and useful for the development,
    manufacture, or effectiveness of Product.
    Under the devices and leads agreements, improvements consist of:
    Section 1.3. Improvements
    “Improvements” shall mean any findings, discoveries,
    inventions, additions, modifications, formulations, or
    changes made by either Licensor or Licensee to product
    design during the term of this Agreement that relate to
    Product.
    The device and leads licenses specifically include requirements
    about quality. Both agreements state:
    Section 2.4. Quality
    a. Product sold by Licensee shall meet the quality
    control standards and specifications established jointly by
    Licensor and Licensee, including any requirements of any
    applicable regulatory agencies.
    b. In the event that quality control of Licensee falls
    below the agreed upon standards and specifications,
    14
    [*14] Licensor shall give Licensee written notice of such failures,
    and Licensee shall, at its expense and within a reasonable
    period set out in the notice, take such corrective action as
    is necessary to restore quality to the appropriate level.
    The MPROC licenses assigned all product liability risk for devices and
    leads to MPROC and stated that MPROC was “liable for all costs and
    damages arising from recalls and product defects.” MPROC took two
    main approaches to managing product liability. First, MPROC made
    every effort to ensure that its finished devices and leads were
    consistently manufactured to the highest standards in order to minimize
    the potential for product failures. Second, in the event of a lapse in
    product quality, the terms of the MPROC licenses dictated that MPROC
    was solely responsible for restoring product quality to agreed-upon
    standards and bore all associated product liability costs.
    In accordance with the devices and leads licenses, MPROC agreed
    to pay what Medtronic US and MPROC determined to be an arm’s-
    length wholesale royalty of 29% to Medtronic US on MPROC’s U.S. net
    intercompany sales of devices and 15% to Medtronic US on MPROC’s
    net intercompany sales of leads. The initial terms of the device and
    leads licenses were through April 30, 2003. The MPROC agreements
    were renewable at both parties’ option and were renewed effective
    May 1, 2003 and 2004. The amendments effective May 1, 2003 and
    2004, renewed the licenses through April 30, 2004 and 2005,
    respectively.
    On May 22, 2007, Medtronic US and MPROC entered into
    amended and restated license agreements, effective May 1, 2005. The
    amendments were made to reflect agreements reached in a
    memorandum of understanding (MOU) between Medtronic US and the
    IRS. The amended agreements included a profit split methodology that
    changed the royalty rates. MPROC would pay a 44% wholesale royalty
    rate to Medtronic US on its net intercompany sales of devices and a 26%
    wholesale royalty rate to Medtronic US on its net intercompany sales of
    leads. Other provisions of the licenses remained in place.
    III.   Pacesetter Agreement
    In the late 1980s and early 1990s Medtronic US and Pacesetter
    were engaged in patent litigation related to Medtronic US’s patents for
    many of its cardiac rhythm stimulation devices, including patents
    underlying its “Activitrax” technology, which established rate-
    15
    [*15] responsive pacemakers that monitor and adapt to changes in
    cardiac rhythm. To prevail in the dispute Medtronic US had to establish
    that its relevant CRDM patents were valid and that Pacesetter had
    infringed on one or more of them. Medtronic US was successful, and in
    late 1991 and early 1992, the district court ruled that (1) Medtronic US’s
    Activitrax patent was valid; (2) Pacesetter was infringing on it; and
    (3) Pacesetter was permanently enjoined from selling three of its five
    rate-responsive CRDM products.
    A.     Background on CRDM Patents
    The development of ICDs started around 1968. Dr. Mirowski was
    a pioneer in the field. His work resulted in implantable pacemakers.
    Dr. Mirowski’s work transformed the industry from high voltage
    external pacemakers to sophisticated implantable devices that use
    multiple leads. He licensed two issued patents and a patent application
    to Medrad, Inc. (Medrad), referred to as the Mirowski license, effective
    on January 30, 1973. The inventions covered by the Mirowski license
    were not proven until years after 1973. In addition to a running royalty
    rate, Dr. Mirowski received an unknown amount of equity in Medrad.
    The Mirowski license is regarded as an important license in the
    CRDM industry. This license was important for gaining market access.
    It was exclusively licensed to Eli Lilly and its subsidiary Cardia
    Pacemakers, Inc. (CPI). Eli Lilly and CPI desired to maximize the
    economic value of the Mirowski license.
    The Mirowski license included patents for an elective intra-atrial
    cardioverter, a semi-implantable defibrillator, and an implantable
    defibrillator. Eli Lilly and CPI entered into numerous license
    agreements and the royalty rate remained 3% for approximately 30
    years. In 1991 Medtronic entered into a cross-license agreement with
    Eli Lilly and CPI that gave Medtronic access to the Mirowski patent
    portfolio in exchange for access to Medtronic’s Activitrax patent.
    Medtronic licensed its patents to competitors, both before and after the
    Pacesetter agreement.
    B.     Pacesetter Litigation Settlement
    From fall 1991 through spring 1992 Medtronic US and Pacesetter
    reached a resolution of the lawsuits and negotiated the Pacesetter
    agreement and the settlement agreement. During that negotiation
    period, Medtronic US’s management analyzed potential settlement
    terms and presented that analysis to Medtronic US’s board of directors.
    16
    [*16] After a tentative deal had been reached on May 26, 1992,
    Medtronic US’s senior vice president and general counsel presented the
    proposed terms to Medtronic US’s board of directors, recommending that
    Medtronic US accept the deal. Medtronic US projected that it would
    receive from Pacesetter total royalty payments of $200 to $300 million
    over the life of the agreement and that the value of the settlement in net
    present value (NPV) terms was expected to be $157 million. The NPV
    was increased to $200 million in a final analysis. According to
    petitioner, $17 million of litigation costs would be avoided by reaching a
    settlement.
    Medtronic US and Pacesetter finalized the terms of their
    agreement in August 1992, and Medtronic US’s board of directors
    approved it on August 26, 1992. The Pacesetter agreement settled nine
    lawsuits and resulted in the dismissal of all litigation with prejudice.
    The terms of the Pacesetter agreement were negotiated between
    competitors. Through the 1990s and 2000s the CRDM industry was
    dominated by three to five major companies, including Medtronic US,
    Pacesetter, and later, St. Jude. At the time Medtronic US and
    Pacesetter negotiated the Pacesetter agreement, Siemens AG (Siemens),
    Pacesetter’s parent company, had worldwide revenue of approximately
    $50 billion, including medical revenue (pharmaceutical, capital
    equipment, and medical device revenue) of approximately $5 billion.
    Siemens competed against Medtronic US as one of the largest
    medical device companies in the world, manufacturing and selling
    cardiac pacing products as well as other medical device products.
    Siemens operated its cardiac pacemaker business through Pacesetter.
    In its 1993 fiscal year Pacesetter controlled approximately 20% of the
    IPG market (the second largest market share at the time) and had
    revenues attributable to the sale of pacing devices of approximately $314
    million. Pacesetter was expected to become a more significant player in
    the tachy business by acquiring or developing its own tachy technology.
    On March 3, 1992, Medtronic US prepared a comparative
    analysis of the potential value of continuing to litigate its patent
    infringement claims relative to settling on terms that would be
    acceptable to Medtronic US. After settlement discussions had been
    initiated, in late April 1992, Pacesetter filed a countersuit alleging
    Medtronic US’s infringement of two of its patents by Medtronic US’s
    pacemakers, Elite and Legend. That was the first time Pacesetter had
    claimed Medtronic US infringed on its patents.
    17
    [*17] Medtronic US and Pacesetter finalized the terms of their
    agreement in August 1992. The financial terms of the finalized license
    were more favorable to Medtronic US than those originally presented in
    May 1992. In addition the finalized terms included a “Future Patent
    Provision,” which was added as Pacesetter’s other suits and
    counterclaims had previously related to unfair competition and
    antitrust claims and Medtronic US’s claims of infringement. Medtronic
    US’s board of directors approved the settlement on August 26, 1992.
    Those final settlement terms were incorporated into the
    Pacesetter agreement, which included two documents: a patent license
    agreement and a settlement agreement. As part of the Pacesetter
    agreement, the parties agreed to cross-license their existing CRDM
    patent portfolios. The CRDM patent portfolio that Medtronic US
    licensed to Pacesetter was closely comparable to the MPROC licenses
    between Medtronic US and MPROC. Pacesetter and Medtronic US also
    settled all other pending litigation between the parties.
    As the result of the Pacesetter agreement, Pacesetter was
    licensed 342 of Medtronic US’s patents. MPROC, by comparison,
    received licenses for upwards of 1,800 of Medtronic US’s patents. As of
    May 2004 approximately 9% of the patents licensed by Medtronic US to
    MPROC were also licensed to Pacesetter in 1992. As of April 2006
    approximately 6.2% of the patents licensed to MPROC were also
    licensed to Pacesetter in 1992.
    C.    Pacesetter Agreement Terms
    The Pacesetter settlement comprised two documents: a patent
    license and a settlement agreement that resolved patent, antitrust, and
    unfair competition litigation with Pacesetter. The two documents
    “comprise[d] one agreement and the entire agreement of the parties.”
    The Pacesetter agreement provided Pacesetter with a nonexclusive
    license to certain Medtronic US patents.
    As part of the Pacesetter agreement, and to “buy peace,” the
    parties agreed to cross-license their pacemaker and patent portfolios.
    Medtronic US attributed no value to the Pacesetter patents it received
    as part of the cross-license. The Pacesetter agreement thus functioned
    as a one-way license from Medtronic US to Pacesetter. Upon execution
    of the Pacesetter agreement, Pacesetter agreed to pay Medtronic US $50
    million up front to compensate Medtronic US for Pacesetter’s past
    infringement and a $25 million royalty prepayment credited against
    18
    [*18] a 1.8% “portfolio access fee” added to the base rates. Both the $50
    million and $25 million payments were characterized by Medtronic US
    as portfolio access royalty payments. Thereafter, Pacesetter agreed to
    pay Medtronic US a 7% royalty on CRDM devices and leads sales in the
    United States and Japan, and a 3.5% royalty on all other international
    sales. Medtronic US did not pay Pacesetter for the license of Pacesetter’s
    patents.
    As part of the Pacesetter agreement the parties also settled on a
    maximum rate clause whereby each party could compel a license to any
    of the other’s CRDM patents developed during the agreement’s term for
    an aggregate rate of no more than 15%. This meant that Siemens,
    Pacesetter’s parent company, was entitled to license all of Medtronic
    US’s CRDM patents for an aggregate rate not higher than 15%, which
    included the 7% royalty that Pacesetter was already paying for current
    patents.
    The maximum rate clause was limited by the key patent clause,
    a narrow exception under which each party could designate up to three
    patents per year as “key.” The designation as a key patent provided a
    roughly three-year period during which the other party could not compel
    a license for the patent. During the terms of the Pacesetter agreement
    Medtronic US did not designate any of its patents as key patents.
    Pursuant to the agreed-upon 7% royalty rate, Medtronic US
    received approximately $506 million in royalty payments over the life of
    the Pacesetter agreement. The amount Medtronic US received exceeded
    its initial expectations of the total royalty payments it would receive
    from the Pacesetter agreement. The 7% royalty rate achieved in the
    Pacesetter agreement was the “most lucrative” deal Medtronic US had
    ever achieved and remains one of the highest royalty rates in the
    pacemaker and defibrillator industry to date.
    D.     St. Jude’s Acquisition of Pacesetter
    The initial term of the Pacesetter agreement was ten years,
    beginning in August 1992. The parties agreed that if Pacesetter were
    sold the term would reset, extending the term to 10 years post sale (but
    not more than 15 years total). The Pacesetter agreement thus
    contemplated the possibility of an extension through 2007.            In
    September 1994 St. Jude acquired Pacesetter from Siemens. Upon
    acquisition of Pacesetter, St. Jude assumed all of Siemens’s rights and
    obligations under the Pacesetter agreement. St. Jude did not modify the
    19
    [*19] terms of the Pacesetter agreement and accepted it in whole,
    including the royalty rate. Per the Pacesetter agreement, the original
    term reset, resulting in a two-year extension. Accordingly, St. Jude paid
    royalties to Medtronic US through September 2004 (i.e., into Medtronic
    US’s 2005 tax year, which began in May 2004).
    The Pacesetter agreement was assigned to St. Jude in its entirety,
    including the maximum rate clause. Survival of the maximum rate
    clause is evidenced by several agreements entered into by St. Jude
    during the term of the Pacesetter agreement; these agreements refer to
    the Pacesetter agreement as being “in full force and effect.” In 1996 St.
    Jude acquired Ventritex, a CRDM competitor, and the agreement stated
    that the Medtronic US agreement was “in full force and effect and will
    not by its terms terminate by reason of the [m]erger.” Additionally a
    2002 amendment to the Pacesetter agreement confirmed the survival of
    the maximum rate clause.
    Siemens could have elected to buy out its remaining royalty
    agreements, instead of selling to St. Jude. The Pacesetter agreement
    included terms, in the event of a sale by Siemens, that Siemens may
    elect to not transfer its rights under the Pacesetter agreement. The
    Pacesetter agreement included terms that provided a formula to
    calculate a payment for buying the remaining royalty obligations.
    IV.   Product Recalls
    Companies in the implantable medical device industry that
    encounter significant product quality issues face a number of direct and
    indirect expenses as a result. These costs include the inherent risk to
    patients; a negative effect on the company’s reputation; loss of market
    share; a decrease in the affected company’s stock price; a shrinkage of
    the overall size of the market; legal settlement costs; direct product
    costs, such as writing off the affected inventory; distracted sales
    representatives; potential defection of sales representatives to
    competitors and related costs to keep sales representatives; other
    remediation costs relating to the product recall; and the distraction of
    management from long-term company goals. Reflecting the risk that
    product reliability poses, the history of the implantable medical device
    industry is littered with companies that were adversely affected,
    acquired by competitors, or driven out of business altogether because of
    actual or perceived significant product quality issues.
    20
    [*20] In 2005 Medtronic issued a recall of certain of its Marquis family
    of ICD and CRT devices because of a problem that sometimes led to the
    battery’s draining too quickly. This caused a concern that the Marquis
    ICD or CRT might fail to deliver appropriate therapy when the patient
    needed it, which could be fatal. The Marquis recall forced Medtronic US
    to divert significant research and development (R&D) and other
    resources to address the underlying issue. Physicians paid careful
    attention to Medtronic US’s response to the Marquis issue to ensure that
    the problem had been resolved and would not be “carried forward into
    other products that [they] were implanting.” The Marquis recall was
    the first significant recall in the implantable medical device industry in
    almost a decade.
    The only reason that Medtronic US did not lose market share as
    a result of the Marquis issue was that its competitor, Guidant, sustained
    a rash of recalls of its own as a result of product quality issues during
    the same period. Medtronic US nevertheless faced significant class
    action litigation on account of the Marquis recall and sustained
    substantial out-of-pocket product liability expenses per year during
    2005 and 2006 (in addition to legal costs) related to that litigation.
    Medtronic US ultimately settled the Marquis class action litigation.
    MPROC bore these out-of-pocket costs for the Marquis devices it made.
    V.    Swiss Supply Agreement
    Medtronic US, MPROC, and Medtronic Europe entered into the
    Swiss supply agreement, effective May 1, 2002, which was in effect
    during 2005 and 2006. Under the Swiss supply agreement Medtronic
    Europe agreed to use its manufacturing operations in Tolochenaz,
    Switzerland, to assist MPROC by manufacturing and supplying devices
    when necessary to meet excess demand. The Swiss supply agreement
    provided that Medtronic Europe would pay Medtronic US directly an
    amount equal to the royalty that MPROC would have paid to Medtronic
    US if MPROC had manufactured the product and had made the sale
    itself. Medtronic Europe also agreed to pay Medtronic US directly an
    amount equal to the MPROC trademark royalty that MPROC would
    have paid to Medtronic US if MPROC had made the sale itself.
    VI.   Notice of Deficiency
    In an audit of petitioner’s 2002 tax return, respondent analyzed
    the devices and leads intercompany transactions and the transfer prices
    among MPROC, Medtronic US, and Med USA, as well as the 2002
    21
    [*21] restructuring of Medtronic US’s operations in Puerto Rico. At the
    conclusion of the examination, respondent accepted the CUT method
    identified by petitioner and its adviser, Ernst & Young, LLP, but
    adjusted the transactions to increase their “profit potential.” On May
    22, 2007, Medtronic US and MPROC entered into amended and restated
    license agreements effective May 1, 2005. The amendments were made
    to reflect agreements reached in an MOU between Medtronic US and
    the IRS. The amended agreements included a profit split methodology
    that changed the royalty rates. MPROC would pay a 44% royalty rate
    to Medtronic US on its net intercompany sales of devices and a 26%
    royalty to Medtronic US on its net intercompany sales of leads.
    Petitioner filed timely its 2005 and 2006 tax returns using the
    MOU. Respondent’s first examination of petitioner’s 2005 and 2006 tax
    returns began in approximately May 2007. On December 23, 2010,
    respondent issued petitioner a notice of deficiency determining
    deficiencies in tax totaling $198,232,199 and $759,383,578 for 2005 and
    2006, respectively. 2 Respondent calculated these deficiencies in reliance
    on a report prepared by respondent’s expert A. Michael Heimert,
    explained in greater detail below, which used the CPM. On July 10,
    2014, respondent amended his Answer to exclude royalty amounts paid
    by MPROC for non-U.S. sales, asserting that his adjustments under
    section 482 were understated by $51,650,809 for 2005 and $59,560,314
    for 2006. Thus, the amounts of the proposed deficiencies related to the
    devices and leads transfer pricing issue are approximately $548,180,115
    for 2005 and $810,301,695 for 2006. 3
    OPINION
    I.         Overview of Parties’ Positions
    Both parties presented experts to support their respective
    positions. We focus on the degree to which experts’ opinions are
    2   These amounts include amounts attributable to issues that the parties have
    settled.
    3 Since petitioner had increased its income to reflect the royalty rates agreed
    upon for a prior tax year’s informal resolution, the adjustment does not include the
    amount by which petitioner had increased its taxable income in reliance on the MOU.
    Petitioner is now seeking a refund by returning to its book reporting position.
    22
    [*22] supported by the evidence. We do not discuss the opinion of any
    expert which does not pertain to our factual conclusions. 4
    A.        Petitioner’s Position
    Petitioner asserts that the Pacesetter agreement can be reliably
    used to establish the royalty rate for the intangibles licensed to MPROC.
    It also contends that the Pacesetter agreement is appropriate for use as
    a CUT in this case. In its posttrial briefs and at a posttrial hearing
    petitioner proposed an unspecified method. See infra Section IV.E. 5
    B.        Respondent’s Position
    Respondent’s position is that the CPM is the best method in this
    case and that the Pacesetter agreement is not a CUT under the
    regulatory standards.      Respondent rejects petitioner’s proposed
    unspecified method and argues that it is based upon the same flawed
    methodology used in petitioner’s CUT method. Respondent further
    argues that petitioner proposes to correct deficiencies in its CUT by
    making adjustments once again to the Pacesetter agreement which
    produced “the deficiencies in the first place,” referring to respondent’s
    arguments in Medtronic I that the Pacesetter agreement was not
    comparable to the MPROC licenses.
    II.    Applicable Statute and Regulations
    Section 482 was enacted to prevent tax evasion and to ensure that
    taxpayers clearly reflect income relating to transactions between
    controlled entities. Veritas Software Corp. & Subs. v. Commissioner,
    
    133 T.C. 297
    , 316 (2009). This section gives the Commissioner broad
    authority to allocate gross income, deductions, credits, or allowances
    between two related corporations if the allocations are necessary either
    to prevent evasion of tax or to reflect clearly the income of the
    corporations. See Seagate Tech., Inc. & Consol. Subs. v. Commissioner,
    
    102 T.C. 149
    , 163 (1994). The Commissioner will evaluate the results of
    a transaction as actually structured by the taxpayer unless it lacks
    economic substance.       
    Treas. Reg. § 1.482-1
    (f)(2)(ii)(A).       The
    Commissioner, however, may consider the alternatives available to the
    taxpayer in determining whether the terms of the controlled transaction
    4   See Appendix for experts who testified during the further trial.
    5 A remote hearing was held on December 2, 2021, to address issues raised in
    the parties’ opening posttrial briefs.
    23
    [*23] would be acceptable to an uncontrolled taxpayer faced with the
    same alternatives and operating under similar circumstances. 
    Id.
     In
    this type of situation, the Commissioner may adjust the consideration
    charged in the controlled transaction according to the cost or profit of an
    alternative, but the Commissioner will not restructure the transaction
    as if the taxpayer had used the alternative. See 
    id.
    To determine true taxable income, the standard to be applied in
    every case is that of a taxpayer dealing at arm’s length with an
    uncontrolled taxpayer. 
    Id.
     para. (b)(1). As in effect during 2005 through
    2006, the regulations provide four methods to determine the arm’s-
    length amount to be charged in a controlled transfer of intangible
    property: the CUT method, the CPM, the profit split method, and
    unspecified methods as described in Treasury Regulation § 1.482-4(d).
    See id. § 1.482-4(a). 6 The best method rule provides that the arm’s-
    length result of a controlled transaction must be determined using the
    method that, under the facts and circumstances, provides the most
    reliable measure of an arm’s-length result. Id. § 1.482-1(c)(1). There is
    no strict priority of methods, and no method will invariably be
    considered more reliable than another. Id. In determining which of two
    or more available methods provides the most reliable measure of an
    arm’s-length result, the two primary factors to take into account are the
    degree of comparability between the controlled transaction (or taxpayer)
    and any uncontrolled comparables, and the quality of data and
    assumptions used in the analysis. Id. subpara. (2).
    A.      CPM
    The CPM evaluates whether the amount charged in a controlled
    transaction is arm’s length according to objective measures of
    profitability (profit level indicators) derived from transactions of
    uncontrolled taxpayers that engage in similar business activities under
    similar circumstances. Id. § 1.482-5(a). Profit level indicators are ratios
    that measure relationships between profits and costs incurred or
    resources employed. Id. para. (b)(4). The appropriate profit level
    indicator depends upon a number of factors, including the nature of the
    activities of the tested party, the reliability of available data with
    respect to uncontrolled comparables, and the extent to which the profit
    level indicator is likely to produce a reliable measurement of the income
    6 The regulations provide an additional method, the cost plus method, for cases
    involving the manufacture, assembly, or other production of goods sold solely to related
    parties. See 
    Treas. Reg. § 1.482-3
    (d)(1).
    24
    [*24] that the tested party would have earned had it dealt with
    controlled taxpayers at arm’s length, taking into account all facts and
    circumstances.    
    Id.
        See generally Coca-Cola Co. & Subs. v.
    Commissioner, 
    155 T.C. 145
    , 210–13, 221–37 (2020).
    B.     CUT Method
    The CUT method evaluates whether the amount charged for a
    controlled transfer of intangible property was arm’s length by reference
    to the amount charged in a comparable uncontrolled transaction. 
    Treas. Reg. § 1.482-4
    (c)(1). If an uncontrolled transaction involves the transfer
    of the same intangible under the same or substantially the same
    circumstances as the controlled transaction, the results derived
    generally will be the most direct and reliable measure of the arm’s-
    length result for the controlled transfer of an intangible. 
    Id.
     subpara.
    (2)(ii).
    The application of the CUT method requires that the controlled
    and uncontrolled transactions involve the same intangible property or
    comparable intangible property as defined in the regulations. 
    Id.
    subdiv. (iii)(A). In order for intangibles to be considered comparable,
    both intangibles must (i) be used in connection with similar products or
    processes within the same general industry or market and (ii) have
    similar profit potential. 
    Id.
     subdiv. (iii)(B)(1).
    The profit potential of an intangible is most reliably measured by
    directly calculating the net present value of the benefits to be realized
    (on the basis of prospective profits to be realized or costs to be saved)
    through the use or subsequent transfer of the intangible, considering the
    capital investment and startup expenses required, the risks to be
    assumed, and other relevant considerations. 
    Id.
     subdiv. (iii)(B)(1)(ii).
    C.     Profit Split Method
    The profit split method evaluates whether the allocation of the
    combined operating profit or loss attributable to one or more controlled
    transactions is arm’s length by reference to the relative value of each
    controlled taxpayer’s contribution to that combined operating profit or
    loss. 
    Id.
     § 1.482-6(a). Allocation under the profit split method must be
    made in accordance with either the comparable profit split method or
    the residual profit split method. Id. para. (c)(1). The comparable profit
    split method is derived from the combined operating profit of
    uncontrolled taxpayers whose transactions and activities are similar to
    25
    [*25] those of the controlled taxpayers in the relevant business. Id.
    subpara. (2).
    D.     Unspecified Method
    Methods not specified in paragraphs (a)(1), (2), and (3) of
    Treasury Regulation § 1.482-4 may be used to evaluate whether the
    amount charged in a controlled transaction is arm’s length. Any method
    used must be applied in accordance with the provisions of Treasury
    Regulation § 1.482-1. 
    Treas. Reg. § 1.482-4
    (d)(1). Consistent with the
    specified methods, an unspecified method should take into account the
    general principle that uncontrolled taxpayers evaluate the terms of a
    transaction by considering the realistic alternatives to that transaction,
    and only enter into a particular transaction if none of the alternatives is
    preferable to it. 
    Id.
     An unspecified method should provide information
    on the prices or profits that the controlled taxpayer could have realized
    by choosing a realistic alternative to the controlled transaction. 
    Id.
     As
    with any method, an unspecified method will not be applied unless it
    provides the most reliable measure of an arm’s-length result under the
    principles of the best method rule. 
    Id.
    E.     Commensurate with Income
    In 1986 Congress amended section 482 by adding: “In the case of
    any transfer (or license) of intangible property (within the meaning of
    section 936(h)(3)(B)), the income with respect to such transfer or license
    shall be commensurate with the income attributable to the intangible.”
    Tax Reform Act of 1986, Pub. L. No. 99-514, § 1231(e)(1), 
    100 Stat. 2085
    ,
    2562–63.
    The House report that accompanied the House version of the 1986
    amendment to section 482 explains the reason for change, in relevant
    part, as follows:
    There is a strong incentive for taxpayers to transfer
    intangibles to related foreign corporations or possessions
    corporations in a low tax jurisdiction, particularly when
    the intangible has a high value relative to manufacturing
    or assembly costs. . . .
    ....
    Many observers have questioned the effectiveness of
    the “arm’s length” approach of the regulations under
    26
    [*26] section 482. A recurrent problem is the absence of
    comparable arm’s length transactions between unrelated
    parties, and the inconsistent results of attempting to
    impose an arm’s length concept in the absence of
    comparables.
    ....
    The problems are particularly acute in the case of
    transfers of high-profit potential intangibles. Taxpayers
    may transfer such intangibles to foreign related
    corporations or to possession corporations at an early
    stage, for a relatively low royalty, and take the position
    that it was not possible at the time of the transfers to
    predict the subsequent success of the product. Even in the
    case of a proven high-profit intangible, taxpayers
    frequently take the position that intercompany royalty
    rates may appropriately be set on the basis of industry
    norms for transfers of much less profitable items.
    ....
    Transfers between related parties do not involve the
    same risks as transfers to unrelated parties. There is thus
    a powerful incentive to establish a relatively low royalty
    without adequate provisions for adjustment as the
    revenues of the intangible vary. There are extreme
    difficulties in determining whether the arm’s length
    transfers between unrelated parties are comparable. The
    committee thus concludes that it is appropriate to require
    that the payment made on a transfer of intangibles to a
    related foreign corporation or possessions corporation be
    commensurate with the income attributable to the
    intangible. . . .
    ....
    . . . Where taxpayers transfer intangibles with a high
    profit potential, the compensation for the intangibles
    should be greater than industry averages or norms. . . .
    ....
    27
    [*27]           In requiring that payments be commensurate with
    the income stream, the bill does not intend to mandate the
    use of the “contract manufacturer” or “cost-plus” methods
    of allocating income or any other particular method. As
    under present law, all the facts and circumstances are to
    be considered in determining what pricing methods are
    appropriate in cases involving intangible property,
    including the extent to which the transferee bears real
    risks with respect to its ability to make a profit from the
    intangible or, instead, sells products produced with the
    intangible largely to related parties (which may involve
    little sales risk or activity) and has a market essentially
    dependent on, or assured by, such related parties’
    marketing efforts. However, the profit or income stream
    generated by or associated with intangible property is to be
    given primary weight.
    H.R. Rep. No. 99-426, at 423–26 (1985), reprinted in 1986-3 C.B.
    (Vol. 2) 1, 423–26 (footnote omitted).
    The conference report that accompanied the 1986 amendment to
    section 482 states, in relevant part, as follows:
    The conferees are also aware that many important
    and difficult issues under section 482 are left unresolved
    by this legislation.     The conferees believe that a
    comprehensive study of intercompany pricing rules by the
    Internal Revenue Service should be conducted and that
    careful consideration should be given to whether the
    existing regulations could be modified in any respect.
    H.R. Rep. No. 99-841 (Vol. II), at II-638 (1986) (Conf. Rep.), reprinted in
    1986-3 C.B. (Vol. 4) 1, 638.
    The Treasury Department and the Internal Revenue Service
    conducted a comprehensive study that was published in 1988. See I.R.S.
    Notice 88-123, 1988-
    2 C.B. 458
     (1988 White Paper). The 1988 White
    Paper concluded that the arm’s-length standard is the norm for making
    transfer pricing adjustments. Id. at 475. The 1988 White Paper
    concluded that Congress intended no departure from the arm’s-length
    standard. Id. The 1988 White Paper explained:
    Looking at the income related to the intangible and
    splitting it according to relative economic contributions is
    28
    [*28] consistent with what unrelated parties do. The general
    goal of the commensurate with income standard is,
    therefore, to ensure that each party earns the income or
    return from the intangible that an unrelated party would
    earn in an arm’s length transfer of the intangible.
    Id. at 472.
    The Treasury Department has repeatedly confirmed that
    Congress intended for the commensurate with income standard to work
    consistently with the arm’s-length standard. See, e.g., Treasury
    Department Technical Explanation of the 2001 U.K.-U.S. Income Tax
    Convention, art. 9, Tax Treaties (CCH) para. 10,911 at 201,307 (“It is
    understood that the ‘commensurate with income’ standard for
    determining appropriate transfer prices for intangibles, added to Code
    section 482 by the Tax Reform Act of 1986, was designed to operate
    consistently with the arm’s-length standard.”); Treasury Department
    Technical Explanation of the 2006 Model Income Tax Convention, art. 9,
    Tax Treaties (CCH) para. 215 at 10,640–41 (same).
    III.   Issues Remaining for Consideration
    On the basis of the Eighth Circuit’s mandate, the Court must
    make additional factual findings in order to determine the arm’s-length
    allocation of income between Medtronic US and MPROC. In agreeing to
    reopen the record in its May 3, 2019, Order, this Court expressly
    identified the issues to be considered pursuant to the Eighth Circuit’s
    mandate:
    (1) whether the Pacesetter agreement is a CUT;
    (2) whether this Court made appropriate adjustments to
    the Pacesetter agreement as a CUT;
    (3) whether the circumstances between Pacesetter and
    Medtronic US were comparable to the licensing agreement
    between Medtronic and [MPROC] and whether the
    Pacesetter agreement was an agreement created in the
    ordinary course of business;
    (4) an analysis of the degree of comparability of the
    Pacesetter agreement’s contractual terms and those of the
    [MPROC] licensing agreement;
    29
    [*29] (5) an evaluation of how the different intangibles affected
    the comparability of the Pacesetter agreement and the
    [MPROC] licensing agreement;
    (6) an analysis that contrasts and compares the CUT
    method using the Pacesetter agreement with or without
    adjustments and the CPM, including which method is the
    best method.
    This Court is to decide the amount of risk and product liability
    expense that should be allocated between Medtronic US and MPROC.
    A.     Whether the Pacesetter Agreement Is a CUT
    In Medtronic I the Court made adjustments to the Pacesetter
    agreement in an effort to reach a result that would provide an arm’s-
    length standard. The result in Medtronic I was not the first time this
    Court approved the CUT method to measure arm’s-length prices for
    intercompany transfers of intangibles. See Veritas Software, 
    133 T.C. 297
    . A comparable with different royalty rate may serve “as a base
    from which to determine the arm’s-length consideration for the
    intangible property involved in this case.” Sundstrand Corp. & Subs. v.
    Commissioner, 
    96 T.C. 226
    , 393 (1991).
    The degree of comparability between controlled and uncontrolled
    transactions is determined by applying the comparability provisions of
    Treasury Regulation § 1.482-1(d); however, specified factors are
    particularly relevant to the CUT method. 
    Treas. Reg. § 1.482-4
    (c)(2)(iii).
    Pursuant to Treasury Regulation § 1.482-1(d)(1), the five general
    comparability factors are (1) functions, (2) contractual terms, (3) risks,
    (4) economic conditions, and (5) property or services. The application of
    the CUT method specifies that the controlled and uncontrolled
    transactions need not be identical but must be sufficiently similar that
    they provide an arm’s-length result. Id. subpara. (2). If there are
    material differences between the controlled and uncontrolled
    transactions, adjustments must be made if they can be made with
    sufficient accuracy to improve the reliability of the results. Id. If
    adjustments for material differences cannot be made, the reliability of
    the analysis will be reduced. Id.
    For intangible property to be considered comparable, the
    intangibles must be used in connection with similar products or
    processes within the same general industry or market and have similar
    profit potential. Id. § 1.482-4(c)(2)(iii)(B)(1). In evaluating the
    30
    [*30] comparability of the circumstances of the controlled and
    uncontrolled transactions the following factors “may be particularly
    relevant”: (1) the terms of the transfer; (2) the stage of development of
    the intangible; (3) rights to receive updates, revisions, or modifications
    of the intangible; (4) the uniqueness of the property; (5) the duration of
    the license; (6) any economic and product liability risks; (7) the existence
    and extent of any collateral transactions or ongoing business
    relationships; (8) the functions to be performed by the transferor and
    transferee; and (9) the accuracy of the data and the reliability of
    assumptions used. Id. subdivs. (iii)(B)(2), (iv). These factors are often
    referred to as the circumstantial comparability factors.
    The Pacesetter agreement is not identical to the MPROC licenses.
    In the light of the Eighth Circuit’s remand, we must analyze the general
    comparability factors to determine whether the Pacesetter agreement
    and the MPROC licenses are similar enough to meet the comparability
    requirements of the regulations.
    Of the five general comparability factors, we conclude that the
    functions, economic conditions, and property or services are not
    comparable. Therefore, the Pacesetter agreement is not a CUT.
    1.     Functions
    Determining the degree of comparability requires an analysis
    that looks at the functions of the two transactions such as R&D; product
    design and engineering; manufacturing; product fabrication; purchasing
    and materials management; marketing and distribution functions;
    transportation and warehousing; and managerial, legal, accounting, and
    other personnel management services. Id. § 1.482-1(d)(3)(i). A
    functional analysis is not a pricing method and by itself does not
    determine an arm’s-length result. Id.
    Respondent argues that the transactions are not comparable
    because different functions were performed. As a licensor under the
    MPROC agreement, Medtronic US performed R&D with respect to
    MPROC products that was 8.2% and 9% of revenues respectively for
    2005 and 2006. Additionally, Medtronic US spent 4.3% of revenues and
    5% of revenues respectively for 2005 and 2006 on business management
    activities for CRDM and Neuro. However, in the Pacesetter agreement,
    Medtronic US as licensor did not perform R&D to develop Pacesetter
    products, nor did it perform any other activities to help Pacesetter
    market its products. Pacesetter performed these services as a licensee.
    31
    [*31] MPROC’s function was that of a finished manufacturing of
    class III medical devices, and this differs from Pacesetter because
    Pacesetter also performed R&D, component manufacturing, and
    distribution. Therefore, we conclude MPROC and Pacesetter did not
    perform the same functions.
    2.    Economic Conditions
    The Pacesetter agreement has a “horizontal” relationship because
    the agreement is between competitors. The MPROC license has a
    “vertical” relationship because the agreement is between a corporation
    and a controlled subsidiary. Respondent contends that the agreements
    cannot be comparable because of the different types of relationships.
    The section 482 arm’s-length standard is premised on the
    principle that a controlled transaction is compared to an uncontrolled
    transaction. See 
    Treas. Reg. § 1.482-1
    (b). The regulations do not require
    that both transactions compared have vertical or horizontal
    relationships. The regulations provide examples in which a controlled
    transaction is compared with transactions between a third party and a
    competitor. See 
    id.
     § 1.482-4(c)(4) (examples 1 and 3). We disagree with
    respondent’s position that the Pacesetter agreement and the MPROC
    licenses cannot be comparable because a transaction with a vertical
    relationship and one with a horizontal relationship are being compared.
    Even though we disagree with respondent’s position regarding
    the relationships between transactions being compared, we still have
    concerns. In this case we can find only one transaction—the Pacesetter
    agreement—that comes close to being a CUT; however, we have
    concerns about the profit potential. The CUT method does not address
    adequately our concerns about the profit potential. Furthermore, we are
    concerned that there is only one comparable transaction with which to
    compare the MPROC licenses.
    Respondent contends that the profit potential of the Pacesetter
    agreement and that of the MPROC licenses are not similar. We
    concluded in Medtronic I that petitioner’s expert Louis Berneman’s
    analysis did not include a comparison of profit potential consistent with
    the regulations’ requirement that the profit potential be similar. See
    Medtronic I, at *129. Respondent’s expert Heimert’s analysis shows
    there was a difference between MPROC’s product profit margin of 54%
    and Pacesetter’s product profit margin of 29%. His analysis also shows
    that revenues for Pacesetter products were $233 and $361 million
    32
    [*32] versus $2.68 and $3.54 billion for Medtronic products for 2005 and
    2006, respectively. Because of the difference in profit potential, we
    conclude that the economic conditions are not comparable.
    3.    Property or Services
    The Pacesetter and the MPROC licenses include comparable
    products; however, the Pacesetter agreement does not include Neuro
    products. This is not enough to make the products not comparable. To
    determine whether the products are comparable, we need to look at the
    property and the services provided. The intangible property licenses
    under the MPROC agreement include secret processes, technical
    information, technical expertise relating to the design of devices and
    leads, and all legal rights including know-how. The total number of
    patents available to MPROC under the licenses reached 1,800 in 2006,
    whereas the Pacesetter agreement licensed 342 patents. Accordingly,
    we conclude that the products licensed are not similar.
    Furthermore, the determination of whether the products and
    services are considered comparable is similar to the determination of
    whether the functions are comparable. For the same reasons that we
    conclude the functions are not comparable, we conclude the products and
    services are not comparable.
    Three of the five general comparability factors are not met, and
    this raises concerns about the CUT as proposed by petitioner. Taking
    into consideration economic conditions, property or services, and
    functions, we conclude that the Pacesetter agreement and the MPROC
    licenses do not meet the general comparability factor requirements.
    Since we conclude that the general comparability factors are not met,
    we do not need to analyze the circumstantial comparability factors to
    determine whether the Pacesetter agreement is a CUT.
    B.     Whether the Tax Court Made Appropriate Adjustments to
    the Pacesetter Agreement as a CUT
    Petitioner contends that appropriate adjustments may be made
    to the Pacesetter agreement and that the Pacesetter agreement with
    appropriate adjustments remains a CUT. Petitioner’s expert Jonathan
    Putnam made adjustments to the CUT and proposed two approaches.
    One approach started with a 7% royalty rate, and the other approach
    started with a 15% royalty rate. For both approaches Putnam calculated
    a low and high wholesale royalty rate. These adjustments differ from
    the Court’s adjustments in Medtronic I. The major difference is the
    33
    [*33] Court made an adjustment for leads by decreasing the rate for
    devices by 50%, instead of having the same royalty rate for both devices
    and leads. See Medtronic I, at *138.
    Respondent’s position is that there are no appropriate
    adjustments that can be made to the CUT. Respondent further contends
    that the Court’s adjustments were not in compliance with the
    regulations and that making adjustments compounds the chances of
    error.
    In the light of the Eighth Circuit’s mandate we have reviewed our
    adjustments in Medtronic I and conclude that adjustments can be made
    to the Pacesetter agreement; however, too many adjustments result in
    the Pacesetter agreement as a CUT not being the best method pursuant
    to the section 482 regulations. During the further trial we heard from
    ten experts and have reached the conclusion that the outcome in
    Medtronic I should be changed. See infra Section IV.D.
    C.     Whether the Circumstances Between Pacesetter and
    Medtronic US Were Comparable to the Licensing
    Agreement Between Medtronic US and MPROC and
    Whether the Pacesetter Agreement Was an Agreement
    Created in the Ordinary Course of Business
    Treasury Regulation § 1.482-1(d)(4)(iii)(A)(1) provides that
    transactions “ordinarily will not constitute reliable measures of an arm’s
    length result” if they are “not made in the ordinary course of business.”
    Treasury Regulation § 1.482-1(d)(4)(iii)(B) (example 1) provides an
    example of a transaction not in the ordinary course of business. In this
    example a U.S. manufacturer sells its products to an unrelated
    distributor. This manufacturer is forced into bankruptcy and sells all
    its inventory at a liquidation price. Since this sale was due to
    bankruptcy, it is not treated as a sale in the ordinary course of business.
    The Pacesetter agreement occurred in the context of resolving
    litigation. The Pacesetter litigation clarified Pacesetter’s and Medtronic
    US’s rights and obligations over Medtronic US patents.
    Petitioner’s experts Richard Cohen, Fred McCoy, and Christopher
    Spadea testified that patent litigation and settlement licenses were and
    are common in the CRDM industry. Litigation can help the parties
    become informed as to their respective legal rights and obligations. It
    can resolve, rather than cast doubt on, a patent’s value. Putnam
    testified that “litigation actually helps us draw better inferences about
    34
    [*34] the value of the IP.” He explained that if there is concern about
    the role of litigation, the 15% provision in the Pacesetter agreement
    should be looked to because it is unrelated to the patents that were being
    litigated in 1992. The 15% provision in the Pacesetter agreement is the
    maximum royalty rate and is for patents identified as key patents.
    Often, in the absence of a lawsuit, royalty negotiations are based
    upon the outcome that the parties would expect in litigation. A patent
    license provides an arm’s-length transaction between two private
    parties that places a monetary value on the patent. Jonathan S. Masur,
    The Use and Misuse of Patent Licenses, 
    110 Nw. U. L. Rev. 115
    , 120
    (2015).
    The Pacesetter agreement included a broad cross-license that
    included patents in addition to those subject to the dispute between
    Medtronic US and Pacesetter. St. Jude’s acquisition of Pacesetter
    reinforces that the Pacesetter agreement was created in the ordinary
    course of business. When St. Jude acquired Pacesetter in 1994, it had
    to determine whether to accept and to continue the terms of the
    Pacesetter agreement. The decision to continue the agreement was
    made in a commercial setting.
    The value of discontinuing the case for Medtronic US was small
    compared to the income from a royalty rate. Petitioner expected that
    continuing litigation with Pacesetter would cost an additional $17
    million. The expected cashflow of the license to Pacesetter was over
    $205 million. Putnam contends that if the cost of litigation is small in
    relation to the total payment, then avoided litigation costs would
    constitute only a small fraction of the payment made to the licensor.
    Putnam further testified that parties resolving a patent
    infringement lawsuit, and parties who are deciding whether to enter
    into a commercial license over patent rights, share several key
    considerations. He explained that there is not an established bright-line
    rule as to when the parties begin considering litigation in the context of
    their negotiations. He stated: “[A]ll licenses are negotiated ‘in the
    shadow’ of litigation, because all licenses only pay royalties when
    circumstances ‘compel’ them to do so.” His view is that the licensee’s
    profit-motivated evaluation of that compulsion exists whether actual
    litigation exists or not and that these evaluations are therefore ordinary.
    He explained that litigation costs are not distortionary because both
    parties avoid litigation costs.
    35
    [*35] Petitioner’s expert Cohen testified about the evolution of cross-
    licenses in the cardio device industry. He explained that the experience
    in the industry was that patents were potent weapons that could enable
    the patent holder to delay a company from introducing an important
    feature or product critical to commercial success of that company. He
    compared the patent process in the cardio device industry to navigating
    a minefield. According to his testimony, the process became a minefield
    because the devices were complex with many features. He explained
    that each of the major competitors was at risk that there would be a
    major innovation and that any one of them might be blocked from
    introducing products incorporating this innovation.
    His assessment is that the major competitors realized eventually
    that they would be better off cross-licensing their patent portfolios and
    focusing on developing the markets. He contends that by cross-licensing
    broad patent portfolios, the major competitors could eliminate the costs
    of attempting to engineer around each other’s patents and the costs of
    litigation. Cohen explained that companies in the cardio device industry
    developed patents to protect their individual innovations, and these
    patent portfolios interfered with the ability of each of the companies in
    the space to introduce products that incorporated all the medically
    important and attractive features without the risk of being sued. He
    reached the conclusion that cross-license agreements following litigation
    or threatened litigation became part of the ordinary course of business
    in the cardio device industry.
    We conclude that the Pacesetter agreement was reached in the
    ordinary course of business; however, this conclusion is not enough to
    conclude that the Pacesetter agreement was a CUT for the purpose
    section 482.
    D.     An Analysis of the Degree of Comparability of the Pacesetter
    Agreement’s Contractual Terms and Those of the MPROC
    Licensing Agreement
    There are enough differences between the Pacesetter agreement
    and MPROC licenses to conclude that the Pacesetter agreement was not
    a CUT; however, there are enough similarities that the Pacesetter
    agreement can be used as a starting point for determining a proper
    royalty rate. The terms of the payments are comparable. See 
    Treas. Reg. § 1.482-4
    (c)(2)(iii). Both agreements had running royalty rates based on
    sales of devices and leads. See 
    id.
     § 1.482-1(d)(3)(ii)(A)(1).
    36
    [*36] Petitioner’s expert Putnam testified that the base royalty rate
    paid by Pacesetter may be viewed as the net of two claims: Medtronic
    US’s claim on Pacesetter’s sales, less Pacesetter’s claims on Medtronic
    US’s sales. Pacesetter’s claims on Medtronic US were minimal.
    According to the Pacesetter agreement, the parties agreed that
    Pacesetter’s grant of patent rights was royalty free and fully paid up.
    He estimated that the value of Pacesetter’s claims against Medtronic US
    at the time of the Pacesetter agreement was to be 0.5% to 1% of
    Pacesetter’s sales. Medtronic US did not benefit substantially from the
    cross-licensing provisions.
    The lump-sum payment of $50 million for past infringement does
    not undermine comparability. Putnam testified that the $50 million
    payment does not contaminate the inferences to be drawn from the
    Pacesetter agreement based on his analysis, which shows that past sales
    had about the same royalty rate of the going forward rate of 7%. The
    $25 million prepaid credit against a portion of the future running royalty
    rate can be accounted for by a 1.8% upward adjustment as suggested by
    Putnam.
    In 1994 St. Jude bought Pacesetter, and this resulted in an
    extension of the Pacesetter agreement. When St. Jude acquired
    Pacesetter, it evaluated the Pacesetter agreement and came to the same
    conclusion that the royalty rate was appropriate. St. Jude did not seek
    to modify the Pacesetter agreement. There is no evidence that St. Jude
    tried to change the Pacesetter agreement post acquisition.
    Petitioner contends that there was no paradigm shift in the time
    between the Pacesetter agreement and the MPROC licenses. The 7%
    royalty rate was among the highest rates in the industry. McCoy
    testified that the rate of 7% and the initial rate of 8.8% were high for the
    industry. He is not aware of any royalty rate in the CRDM industry
    which is higher.
    Petitioner’s expert Cohen concluded that between 1992 and 2004,
    there was no “technological paradigm shift” in the CRDM industry. He
    explained in his report that the Mirowski patent was issued in 1990 and
    was the foundation patent for CRT devices. He concluded that
    advancements were made in 2002 and these advances simply involved
    additional pacing functionality. His analysis supports that there was no
    paradigm shift because there was no sustained increase in market
    growth.
    37
    [*37] Petitioner’s expert Glenn Hubbard testified that the gross
    margins of Medtronic US, Boston Scientific, Guidant, and St. Jude did
    not show any dramatic change from 1992 to 2006. He referenced a 2005
    Morgan Stanley report which estimated that Medtronic US’s 2004 gross
    profit margin of 75.2% would increase to 76.8% by 2010. Hubbard
    concluded no adjustments to royalty rates specified in the Pacesetter
    agreement are needed to account for broad changes in the medical device
    industry during 2005 and 2006.
    The Pacesetter agreement Included a maximum rate of 15%,
    which was for key patents. This shows that Medtronic US was offering
    its CRDM portfolio to St. Jude for no more than 15% through 2004, and
    this was about the same time the MPROC licenses were negotiated.
    Medtronic US never designated any patents as key patents. This
    inaction supports that there was not a paradigm shift.
    Even though there is a level of comparability between the
    Pacesetter agreement and the MPROC licenses, it is not enough to
    conclude that the CUT is the best method for the reasons previously
    discussed. The comparability of contractual terms is just one of many
    factors that needs to be considered.
    E.     An Evaluation of How the Different Intangibles Affected the
    Comparability of the Pacesetter Agreement and the MPROC
    Licensing Agreement
    Generally, intangible property is considered comparable if it is
    used in connection with similar products. 
    Treas. Reg. § 1.482
    -
    4(c)(2)(iii)(B)(1)(i). We have concluded previously that the intangibles
    are not comparable enough to meet the general comparability factors.
    See supra Section III.A.
    F.     An Analysis That Contrasts and Compares the CUT
    Method Using the Pacesetter Agreement with or Without
    Adjustments and the CPM, Including Which Method Is the
    Best
    Under the CUT method, controlled and uncontrolled transactions
    must involve the same or comparable intangible property, and
    differences in contractual terms and economic conditions should be
    considered. See 
    Treas. Reg. § 1.482-4
    (c)(2)(iii). The regulations provide
    contractual and economic factors to assess the comparability of
    circumstances between a controlled and an uncontrolled transaction for
    the CUT method. See 
    id.
     subdiv. (iii)(B)(2). These factors were
    38
    [*38] discussed supra Section III.A., and we concluded that the general
    comparability factors were not met and the circumstantial
    comparability factors need not be considered.
    In the Court’s previous Opinion we found that the royalty rates
    petitioner proposed are not arm’s length because appropriate
    adjustments were not made to the CUT method to account for variations
    in profit potential. See Medtronic I, at *129. We concluded that
    “Berneman’s analysis unacceptably lacks an examination of the profit
    potential of his comparable transactions, including the Pacesetter
    agreement as defined by regulations.” Id. We have not changed our
    view regarding the Berneman analysis and still find that it is necessary
    to make adjustments to the Pacesetter agreement.
    Respondent contends that the Pacesetter agreement was not a
    CUT because the patent licenses were not comparable and the
    Pacesetter agreement was not entered into in the ordinary course of
    business. Respondent further contends that using the Pacesetter
    agreement as a CUT results in MPROC’s receiving the “lion’s share” of
    profits earned from the sales of CRDM and Neuro products. This line of
    argument raises the question of why MPROC’s profitability dwarfs that
    of Medtronic US, the owner of the “crown-jewel” intangibles.
    Respondent compares the MPROC licenses to the arrangement
    Coca-Cola had with its affiliates. A CPM analysis was appropriate for
    the nature of the assets and the activities performed by the controlled
    taxpayers in Coca-Cola Co., 
    155 T.C. at 217
    –18. The nature of the assets
    owned and the activities performed by MPROC are not comparable. In
    Coca-Cola Co. the manufacturing process entailed forms of extraction,
    filtration, mixing, blending, aging, and precision filing. The affiliates
    performed routine quality control pursuant to detailed specifications
    from the U.S. parent. 
    Id.
     at 159–60. With one exception, the affiliates
    had no employees of their own specifically dedicated to quality
    assurance. 
    Id. at 160
    . The taxpayer’s experts agreed that the affiliates’
    manufacturing activity was a routine activity that could be
    benchmarked to the activities of contract manufacturers, meriting
    compensation no greater than cost plus 8.5%. 
    Id.
     The manufacturing
    of sweetened beverages under these circumstances does not compare to
    the manufacturing of life-saving devices for which quality is of the
    utmost importance. We previously concluded that the role of MPROC
    was more than that of a routine manufacturer of finished products.
    Medtronic I, at *106–08.
    39
    [*39] Respondent maintains the same position from Medtronic I that
    the CPM is the best method to price the MPROC licenses. In Medtronic I
    we concluded that an allocation of 6%–8% was not reasonable. Id.
    at *117. Respondent is asking the Court to reconsider its position and
    conclude that Heimert’s original CPM is the best method. The Court is
    not going to reverse its opinion that petitioner met its burden of showing
    that respondent’s allocations were arbitrary and capricious. See id.
    at *118.
    Petitioner’s expert Hubbard testified about the challenges of
    conducting a CPM with regard to the MPROC licenses and the
    importance of the tested party. Heimert used MPROC as the tested
    party. Hubbard explained that the tested party is critical because
    residual profits are attributed to the nontested party. He explained
    further that choosing one tested party or the other can yield
    substantially different results, and thus substantially different
    estimates of royalty rates. He concludes that when the tested party
    predominantly performs one business function, as did MPROC, it is
    important to select comparables that predominantly perform the same
    business function. According to Hubbard, it is preferable to choose as
    the tested party the entity whose functions, activities, and risks can be
    benchmarked most reliably to comparable companies.
    Hubbard testified that neither Medtronic US nor MPROC is an
    obvious candidate to serve as the tested party because neither Medtronic
    US nor MPROC has functional roles and risks that can be easily
    benchmarked. Additionally, he was critical of Heimert’s selection of
    MPROC as the tested party. Hubbard concluded that the Heimert CPM
    is incomplete because it fails to give proper consideration to the fact that
    MPROC performed nonroutine functions such as ensuring product
    quality and assuming the risk for product liability.
    The CPM benchmarks the arm’s-length level of operating profits
    earned by the tested party with reference to the level of operating profits
    earned by comparable companies. See 
    Treas. Reg. § 1.482-5
    (b)(1).
    According to Hubbard, from an economic perspective certain product
    characteristics should be considered in assessing the comparability of
    companies. His report indicated that the FDA estimates that about 10%
    of medical devices receive the class III designation. He concludes that
    the risks and returns are much lower for class I devices than they are
    for class III devices. Class II devices, such as powered wheelchairs, pose
    a higher risk to patients but differ from class III devices, which sustain
    or support life. Hubbard explained that a company that largely
    40
    [*40] produces elastic bandages is unlikely to be comparable to a
    company that largely produces implantable pacemakers, even though
    both companies “produced medical devices.”
    Hubbard concludes that a CPM analysis will be unreliable when
    there are material differences in factors that affect profitability, such as
    varying cost structures, differences in business experience, and
    differences in management efficiency. In his report he conducted a
    search to find comparables to MPROC but did not find any. He reached
    this conclusion by searching FDA databases for class III companies.
    With the exception of Greatbatch Medical (Greatbatch), none of
    Heimert’s comparables produced exclusively class III devices.
    Hubbard further testified that there is a distinction between
    medical devices that are short lived and those that are long lived.
    Implantable devices are considered short lived because each is provided
    only once to a single patient. According to Hubbard, short lived medical
    devices tend to have high operating margins, as they significantly
    improve patient health and are subject to high rates of reimbursement
    for healthcare providers. In contrast he explained that long lived
    products, such as hospital beds or syringes, often have lower profit
    margins.
    Hubbard concluded that there were no appropriate comparables
    if MPROC were the tested party. We also raised concerns about
    Heimert’s comparables in Medtronic I. See Medtronic I, at *109–12. In
    the light of the Eighth Circuit’s mandate we have reexamined the CPM
    method and reach the same conclusion that we did in Medtronic I that
    the use of Heimert’s original CPM was an abuse of discretion. Id.
    at *118.      The Court’s CUT in Medtronic I requires too many
    adjustments, and the CPM results in an unrealistic profit split and too
    high a royalty rate. Therefore, we conclude neither method is the best
    method.
    G.     Allocation of Product Liability Expenses
    Pursuant to the MPROC licenses all the product liability risk was
    allocated to, and borne by, MPROC. Similarly, under the Pacesetter
    agreement all risk was borne by Pacesetter. Respondent contends that
    product liability risk did not rest exclusively with MPROC under the
    intercompany agreements. The MPROC license states that MPROC is
    “liable for all costs and damages arising from recalls and product
    defects.”
    41
    [*41] Pursuant to the regulations “the consequent allocation of risks . . .
    that are agreed to in writing before the transactions are entered into
    will be respected if such terms are consistent with the economic
    substance of the underlying transactions.”       
    Treas. Reg. § 1.482
    -
    1(d)(3)(ii)(B)(1). The regulations specify that risks include product
    liability risks. 
    Id.
     subdiv. (iii)(A)(5). MPROC’s assumption of the
    product liability risk was consistent with the economic substance
    because MPROC had the financial capacity to bear the burden of the
    product liability risk. MPROC had managerial and operational control
    over the manufacturing operations for the finished devices and leads.
    Respondent contends that a $25 million adjustment can be made
    to the CPM to adjust for the assumption that MPROC bore all product
    liability costs for CRDM and Neuro products. According to respondent’s
    expert from the prior trial Paul Braithwaite the ultimate claimed costs
    for injuries and related legal expenses were $25.2 million and $26.2
    million for 2005 and 2006, respectively. In contrast petitioner’s expert
    from the prior trial Paul Dowden testified that the value of the product
    liability insurance Medtronic US received from MPROC during 2005
    and 2006 was between $220 million and $235 million for each year.
    MPROC had two responsibilities for managing product liability.
    First, MPROC needed to minimize the potential for product failures by
    making every effort to ensure that its finished devices and leads were
    manufactured to the highest standards.          Second, MPROC was
    responsible for restoring product quality and bearing all associated
    product liability costs.
    Petitioner’s expert Hubbard testified that, in theory, MPROC had
    uncapped exposure to product liability risk; however, in practice,
    MPROC’s liability would be capped by the aggregate value of all its
    assets that could be made available to cover the product liability related
    claims and costs. He discussed the value of prior recalls. MPROC had
    product liability costs of $117 million of the $205 million total costs from
    the Marquis device recall and $271 million of the $324 million total costs
    of the Sprint Fidelis defibrillator lead recall. He explained that certain
    costs were allocated to other Medtronic entities in compliance with the
    MOU entered into between petitioner and respondent.
    Respondent has proposed a product liability adjustment of $25
    million per year as part of the proposed modified CPM. This adjustment
    is not in line with the costs associated with prior recalls. We are not
    42
    [*42] convinced by the evidence that respondent’s adjustment is enough
    to account for MPROC’s role regarding product liability claims.
    IV.    Best Method
    A.      Introduction
    In Medtronic I we reviewed respondent’s section 482 reallocations
    for abuse of discretion. On remand the Eighth Circuit did not overrule
    this holding, nor did the Eighth Circuit hold that this Court’s choice of
    transfer pricing was incorrect. Rather, the Eighth Circuit found that
    the analysis in this case required more detailed comparison and
    explanation as to comparability of circumstances, contractual terms,
    intangibles, and risk and product liability expense, without mention as
    to the appropriateness of any particular method.
    At trial both parties mostly maintained their original positions
    regarding which transfer pricing method is the best method as it relates
    to the royalty rates for devices and leads. In the light of the Eighth
    Circuit’s mandate we now analyze the testimony provided by expert
    witnesses from both parties.
    B.      Analysis of Respondent’s Position
    Respondent maintains the position that the CPM is the best
    method and continues to rely upon the analysis of Heimert. In his
    analysis for the further trial Heimert kept MPROC as the tested party
    and the same 14 companies to benchmark the return to MPROC. His
    analysis concludes that the technology wholesale royalty rates are 64.3%
    and 68.4% for 2005 and 2006, respectively. 7
    During trial Heimert testified that the 14 comparables could be
    reduced to the comparables that made implantables. At the conclusion
    of the further trial, he made alterations to his CPM. Instead of using 14
    comparables, calculations were made using 5 of the 6 comparables that
    manufactured implantables. Greatbatch was excluded because of its
    manufacture of components rather than devices. Heimert testified that
    he was not able to find any companies that performed a role similar to
    MPROC which was the manufacturer of devices and leads, class III
    products.
    7 These rates do not account for the 8% trademark wholesale royalty rate which
    was addressed in Medtronic I.
    43
    [*43] The only other adjustment Heimert made was for product
    liability. Respondent, assuming arguendo that MPROC bore all product
    liability risk, made adjustments to account for product liability. These
    adjustments are $25.2 million and $26.2 million for 2005 and 2006,
    respectively.
    Respondent’s calculations reducing the number of comparables
    and making an adjustment for product liability result in wholesale
    royalty rates of 59.6% for 2005 and 64% for 2006. We refer to this
    calculation as respondent’s modified CPM. The modified CPM would
    result in total system profits for MPROC of 14% in 2005 and 12% in
    2006. Respondent did not suggest an unspecified method and is opposed
    to using an unspecified method. 8
    When the Commissioner has determined deficiencies based on
    section 482, the taxpayer bears the burden of showing that the
    allocations are arbitrary, capricious, or unreasonable. See Sundstrand
    Corp., 
    96 T.C. at 353
     (first citing G.D. Searle & Co. v. Commissioner, 
    88 T.C. 252
    , 358 (1987); and then citing Eli Lilly & Co. v. Commissioner, 
    84 T.C. 996
    , 1131 (1985), aff’d on this issue, rev’d in part and remanded,
    
    856 F.2d 855
     (7th Cir. 1988)). The Commissioner’s section 482
    determination must be sustained absent a showing of abuse of
    discretion. See Bausch & Lomb, Inc. v. Commissioner, 
    92 T.C. 525
    , 582
    (1989), aff’d, 
    933 F.2d 1084
     (2d Cir. 1991). “Whether respondent has
    exceeded his discretion is a question of fact. . . . In reviewing the
    reasonableness of respondent’s determination, the Court focuses on the
    reasonableness of the result, not on the details of the methodology used.”
    Sundstrand Corp., 
    96 T.C. at 353
    –54; see also Am. Terrazzo Strip Co. v.
    Commissioner, 
    56 T.C. 961
    , 971 (1971).
    The modified CPM results in retail royalty rates of 40.7% and
    48.8% for 2005 and 2006, respectively, and wholesale royalty rates of
    59.6% and 64% for 2005 and 2006, respectively, whereas the CPM
    without modifications resulted in wholesale royalty rates of 64.3% and
    68.4% for 2005 and 2006, respectively. The modified CPM results in
    MPROC’s earning 14% of the profits in 2005 and 12% of the profits in
    2006. The CPM without modifications results in MPROC’s earning 8.1%
    8 In respondent’s supplemental brief, respondent included a chart that shows
    various wholesale royalty rates, including a Pacesetter comparable profit split method
    resulting in a wholesale royalty rate 62.4%. Respondent provided no analysis for this
    method.
    44
    [*44] of the profits in 2005 and 5.6% of the profits in 2006.        See
    Medtronic I, at *95.
    The problems that Medtronic I addressed regarding Heimert’s
    CPM remain the same. Even reducing the comparables from 14 to 5,
    they still have fundamentally different asset bases and involve different
    functions and risks from those of a class III medical device
    manufacturer. Heimert limits the comparables to Bard, Inc. (Bard),
    Orthofix International NV (Orthofix), Stryker, Wright Medical Group,
    Inc. (Wright Medical Group), and Zimmer Holdings, Inc. (Zimmer). Four
    of these companies manufactured orthopedic devices, including
    reconstructive orthopedic devices. The other company made a broad
    range of vascular and urology products. None of the five made similar
    cardio or neuro devices. Additionally, none of the five companies
    performed only the function of finished device manufacturing. All five
    performed some combination of the following functions: R&D,
    component manufacturing, finished medical device manufacturing, and
    distribution.
    Petitioner’s expert Hubbard expressed concern regarding
    Heimert’s subset of five companies because all of the companies also
    made class I and/or class II devices, not just class III devices as
    petitioner did. According to Hubbard, limiting the comparables to
    implantables resulted in blended profitability measures across the
    several functions of Heimert’s comparables when only one of those
    functions, the manufacturing of medical devices, is relevant for the CPM
    in this matter. Even with reducing the number of comparables, the
    remaining companies are still not good enough comparables to result in
    the CPM’s being the best method.
    Hubbard explained that MPROC focused exclusively on
    manufacturing finished medical devices, specifically class III medical
    devices. He opined that to be able to use the CPM, comparables should
    “conduct similar functions and bear similar risks.” He contends that if
    Heimert’s comparables focused exclusively on class III finished medical
    device manufacturing, then his CPM would appropriately treat MPROC
    as the “pure-play manufacturer of class III medical devices that it was.”
    Even if Heimert’s comparables are reduced to five companies that make
    implantable devices, there are still flaws with the comparables.
    Hubbard explained that a company’s products are among the
    factors that influence the company’s profitability. He disagreed with
    Heimert’s position that narrowing the set of comparables to the
    45
    [*45] implantables does not affect the overall range of return on assets
    (ROAs). Hubbard’s calculations show that the median ROA for the six
    implantables (including Greatbatch) is 40.4% from 2003 to 2005 and the
    median ROA for 14 comparables is 28.1%. From 2004 to 2006 the
    median ROA for the six implantables is 40.5%; whereas, the median for
    the 14 comparables is 26%.
    The regulations provide that when determining which method
    provides the most reliable measure of an arm’s-length result, the two
    primary factors to take into account are (1) the degree of comparability
    between the controlled transaction (taxpayer) and any uncontrolled
    comparables and (2) the quality of the data and assumptions used in the
    analysis. 
    Treas. Reg. § 1.482-1
    (c)(2). Heimert’s CPM analysis falls short
    regarding the comparables and assumptions used. See Medtronic I,
    at *109–14.
    Hubbard explained that even though the five companies making
    implantables have higher ROAs, his view has not changed regarding the
    CPM. He contends that the five comparables that Heimert classifies as
    makers of implantables do not represent a profit level indicator of pure-
    play implantable medical device manufacturers. Two of the five were
    engaged in R&D, component manufacturing, and distribution, in
    addition to finished medical device manufacturing. The other three
    were involved in R&D and distribution, aside from finished medical
    device manufacturing. All five companies made class I and/or class II
    devices in addition to class III devices. Both Hubbard and Heimert
    agree that data limitations prevent extracting information pertaining to
    only class III finished medical devices from the aggregate financial data.
    Hubbard contends that the comparability with respect to size of
    the comparable company does matter. He criticizes Heimert’s analysis
    for the range in the size of companies and asserts that there is no
    justification for Heimert to include companies with lower or higher
    levels of revenue or operating assets than MPROC in his comparables.
    When analyzing comparable companies, Hubbard looked at the size of
    the companies and used revenues as a proxy. He was unable to identify
    companies similar in size to MPROC. Only one of Heimert’s five
    comparables (Bard) had revenues comparable to MPROC’s revenues of
    approximately $2 billion in 2005. 9 Stryker and Zimmer had over double
    MPROC’s revenues whereas Wright Medical Group and Orthofix had
    less than half of MPROC’s 2005 revenue. Additionally, Hubbard’s
    9   MPROC’s revenue for 2005 based on Hubbard’s calculations.
    46
    [*46] criticism of the selection of MPROC as the tested party still applies
    to respondent’s CPM.
    Respondent contends that the CPM is the best method and
    commensurate with income. The commensurate with income standard
    does not specify a specific method or a certain range of profits. The
    modified CPM results in an allocation of 86.9% of the profits to
    Medtronic US and Med USA and 13.1% to MPROC. 10 Heimert’s original
    CPM analysis concludes that 6%–8% of the system profits should be
    allocated in order for the transactions to be arm’s length. See id. at *119.
    MPROC was an FDA-registered facility responsible for putting
    together sophisticated medical devices that would remain in the human
    body for years. See id. at *107. All the components for the devices and
    leads could be made perfectly, but there could be problems if they are
    not put together perfectly. Id.
    Hubbard concluded that MPROC played a pivotal role in ensuring
    the quality of finished CRDM and Neuro devices and leads. He
    explained that the quality of such class III medical devices was
    “paramount” because their failure could prove fatal to patients. MPROC
    employed a highly trained workforce that was ultimately responsible for
    inspecting finished devices and leads, ensuring that the finished devices
    functioned property. Hubbard concluded that quality is more important
    for a manufacturer solely of class III devices than for the companies
    Heimert selected as comparables.
    The modified CPM is a minor change to the CPM. The
    modifications are not enough to overcome the flaws. The adjustment for
    product liability is inadequate. See supra Section III.G. Therefore, the
    modified CPM is not the best method and there is an abuse of discretion
    by respondent which is due to the use of flawed comparables. Petitioner
    has shown that respondent has implemented his methodology in an
    unreasonable manner, e.g., by employing erroneous assumptions,
    incorrect data, or analysis that is internally inconsistent. See Coca-Cola
    Co., 
    155 T.C. at 203
    ; see also Veritas Software, 
    133 T.C. at 323
    –27
    (finding allocations based on a discounted cashflow methodology
    unreasonable where the Commissioner “employed the wrong useful life,
    the wrong discount rate, and an unrealistic growth rate”); Altama Delta
    Corp. v. Commissioner, 
    104 T.C. 424
    , 466 (1995) (finding allocations
    unreasonable where the Commissioner implemented his cost-plus
    10   This calculation is an average for 2005 and 2006.
    47
    [*47] method by marking up operating profit margins instead of gross
    profit margins); Seagate Tech., Inc., 
    102 T.C. at 192
     (rejecting expert’s
    pricing of component parts upon finding that his methodology “d[id] not
    meet the description of the cost-plus method” in the regulations); Achiro
    v. Commissioner, 
    77 T.C. 881
    , 900 (1981) (rejecting the Commissioner’s
    allocation where he made no “reasonable attempt[] to reflect arm’s-
    length transactions among the related entities”). In this case the use of
    comparables that did not make solely class III medical devices, as were
    the devices finished manufactured by MPROC, resulted in an abuse of
    discretion by respondent.
    C.     Analysis of Petitioner’s Position
    Petitioner relies on the testimony of its expert Putnam to
    determine royalty rates. Petitioner maintains its position that the CUT
    is the best method and that the Pacesetter agreement is a valid CUT.
    Putnam offered two approaches adjusting the royalty rate, and
    for both approaches he estimated low and high rates. The first approach
    using retail royalty rates starts with a 7% rate, the rate of the Pacesetter
    agreement. The resulting wholesale royalty rates under this approach
    are 22.3% and 33.4% for cardio and 17.9% and 27.5% for Neuro. The
    second approach starts with 15% retail royalty rate which is equivalent
    to the maximum rate in the Pacesetter agreement. The wholesale
    royalty rates under this approach are 29.4% and 33.8% for cardio and
    25% and 27.9% for Neuro.
    Putnam made an adjustment to the Pacesetter agreement to
    account for profit potential. This adjustment is to account for the
    differences between Pacesetter in the 1992 to 1994 timeframe and
    petitioner’s CRDM business in the 2003 to 2005 timeframe. His
    conclusion is that a retail rate adjustment of 0.9%–4.9% is needed. His
    report states: “That adjustment is not linked to any particular source;
    any such linkage would be inherently imprecise, because the two
    companies’ financial statements do not reliably reveal the cause of these
    differences.”
    Putnam’s suggested adjusted retail royalty rate increase of 0.9%–
    4.9% is a broad range. In Medtronic I we concluded that a retail royalty
    adjustment of 3.5% is necessary to account for the difference in profit
    potential. Evidence presented during the further trial did not convince
    us that this adjustment should be lower than 3.5%. See Medtronic I,
    at *136.    Furthermore, we conclude that an adjustment of this
    48
    [*48] magnitude results in the transaction’s not having the same profit
    potential as defined in Treasury Regulation § 1.482-4(c)(2)(iii)(B)(1)(ii).
    According to respondent’s expert Brian Becker, Putnam’s royalty rate
    would result in MPROC’s being six times as profitable as Pacesetter.
    Petitioner must show the allocations that it proposes satisfy the
    arm’s-length standard. See Eli Lilly & Co. v. Commissioner, 
    856 F.2d at 869
     (and the cases cited thereat). We continue to have concerns about
    petitioner’s use of the CUT method, including the version put forth by
    Putnam. His low CUT (calculated at the low end of the range) resulted
    in a blended wholesale royalty rate of 21.8%, which is significantly lower
    than the blended wholesale royalty rate of 38% concluded in
    Medtronic I. The adjustments to the Pacesetter agreement did not
    result in a reliable CUT. As in Medtronic I, we are concerned about
    profit potential and that an adjustment of 3% is not adequate for know-
    how. See Medtronic I, at *127–29. Petitioner has not shown that its
    allocation meets the arm’s-length standard required by section 482.
    In response to the Court’s questions at the conclusion of the
    further trial and the posttrial hearing, petitioner changed its focus to its
    proposed unspecified method.         In its Posttrial Answering Brief
    petitioner contends that its unspecified method “bridges the gap”
    because it addresses the Court’s questions about the profitability of its
    CRDM and Neuro businesses relative to Pacesetter.
    Petitioner recommends two versions of an unspecified method
    that combines aspects of the CUT with the Pacesetter agreement as a
    comparable and of the CPM. It rejects an unspecified method averaging
    the CUT and the CPM. Petitioner contends further that after
    considering alternatives there is “no gap to bridge” beyond its
    unspecified method. For this reason we will not analyze in further detail
    Putnam’s two proposed royalty rates using the CUT method with
    adjustments made to the Pacesetter agreement.
    D.     Unspecified Method
    The 1968 section 482 regulations promulgated three methods, in
    order of preference: the comparable uncontrolled price method, the
    resale price method, and the cost plus method. See 
    Treas. Reg. § 1.482-2
    (e)(1)(ii) (1969). These regulations provide for another method
    if none of these three specified methods could “reasonably be applied
    under the facts and circumstances of a particular case.” Sundstrand
    Corp., 
    96 T.C. at 358
    . Courts have approved the use of unspecified
    49
    [*49] methods and referred to these methods as appropriate methods
    within the context of the regulations. See Eli Lilly & Co., 
    84 T.C. at 1147
    –51; Mornes, Inc. v. Commissioner, 
    T.C. Memo. 1982-27
    , aff’d,
    
    696 F.2d 1000
     (8th Cir. 1982); E.I. Du Pont De Nemours & Co. v. United
    Sates, 
    221 Ct. Cl. 333
    , 350–54 (1979).
    After Congress amended section 482 to include the commensurate
    with income provision, changes were made to the regulations. See Tax
    Reform Act of 1986 § 1231(e)(1). In 1994 Treasury promulgated new
    regulations that superseded the 1968 regulations. See 
    Treas. Reg. § 1.482-1
    (j)(4); T.D. 8552, 1994-
    2 C.B. 93
    . These regulations replaced
    the hierarchical approach of the 1968 regulations with the “best method
    rule” and provide four permissible methods for determining the arm’s-
    length result for controlled transfer of intangible property: the CUT
    method; the CPM; the profit split method; and an “unspecified method”
    subject to constraints set forth in the regulations. 
    Treas. Reg. §§ 1.482
    -
    1(c)(1), 1.482-4(a); see also Coca-Cola Co., 
    155 T.C. at 211
    –12. There is
    no strict priority of methods, and no method is considered to be more
    reliable than another. 
    Treas. Reg. § 1.482-1
    (c)(1).
    If neither party has proposed a method that constitutes “the best
    method,” the Court must determine from the record the proper
    allocation of income. Sundstrand Corp., 
    96 T.C. at 354
    . After hearing
    expert witnesses during further trial and reviewing the parties’
    positions, we conclude that there are some benefits to the CUT, and the
    Pacesetter agreement is an appropriate comparable as a starting point.
    We are concerned that there is only one comparable, that adjustments
    need to be made, and that if too many adjustments are made, the
    Pacesetter agreement might cease to be useful even as a starting point.
    We reviewed the adjustments made in Medtronic I and conclude
    that improvement can be made to the adjustments and that fewer
    adjustments can be made. Even with making adjustments we further
    conclude that, to be consistent with the Eighth Circuit’s mandate, the
    CUT is not the best method.
    Petitioner originally made an allocation for the devices and lead
    licenses based on retail royalty rates of 29% and 15%, respectively. See
    Medtronic I, at *120. We concluded that these royalty rates were not
    arm’s-length transactions. See 
    id.
     at *120–29. In Medtronic I we
    concluded that the wholesale royalty rate for devices was 44% and the
    rate for leads was 22%. See 
    id.
     at *137–38. We made the following
    adjustments:
    50
    [*50]              Adjustment           Percentage (in
    retail)
    Starting royalty               17%
    rate
    Know-how                         7
    Profit potential                3.5
    Scope of product                2.5
    Total                         30%
    See id. at *137.
    After considering the testimony of petitioner’s expert witnesses
    McCoy, Cohen, Putnam, and Hubbard, and respondent’s expert
    witnesses Heimert and Peter Crosby, we conclude the royalty rate
    should be the same for devices and leads. We still have the same view
    of Heimert’s original CPM as we did in Medtronic I. See id. at *88–119.
    Heimert’s CPM is still not the best method, and neither is respondent’s
    adjusted CPM the best method because of the lack of class III
    comparables.
    Petitioner proposed an unspecified method that combines
    elements of the CUT and the CPM. It provides two versions of this
    method, each consisting of three steps. The first two steps are the same
    for both versions, and the third step is modified by changing the ratio by
    which residual profit is allocated between Medtronic US and MPROC.
    The first version includes a 35% allocation of residual profits to
    Medtronic US and a 65% allocation to MPROC (35/65 allocation),
    resulting in a wholesale royalty rate of 35.7%, and the second version
    includes a 50% allocation of residual profits to Medtronic US and a 50%
    allocation to MPROC (50/50 allocation), resulting in a wholesale royalty
    rate of 40%. We are concerned that the first version results in a
    wholesale royalty rate lower that the blended wholesale royalty rate of
    38% and the second version is only 2 percentage points higher than 38%.
    Relying upon the expert testimony from the further trial, we
    conclude that the royalty rate in Medtronic I is too low. We are still
    concerned that petitioner’s position does not take into consideration
    51
    [*51] adequately the difference in profit potential between MPROC and
    the Pacesetter agreement.
    Respondent’s expert Heimert testified that it was important for
    products to have “some level of close product similarity” and that “it is
    always a matter of degree.” He further testified: “[W]e want to try to get
    as close a comparability as we can.” Specifically, regarding the CPM he
    testified: “[W]hat we’re sort of looking at is a blender amalgamation of
    returns from many different companies in employing a CPM . . . to
    smooth out some of these differences.” He further testified that some
    comparables are stronger in one area while other comparables are
    weaker in some areas.
    During his testimony Heimert suggested using 5 comparables
    instead of 14 as he did in his original report. We are concerned that the
    remaining five companies are not comparable enough to makers of
    devices and leads. He testified that some of the implantables that are
    used as comparables are orthopedic parts that do not have “batteries,
    capacitors, or a heavy degree of software in them” and that would not be
    “necessarily equivalent.” His testimony also indicated that potential
    risk to a patient should be considered.
    Limiting the comparable companies to five is an improvement;
    however, the remaining five comparables are not identified as solely
    class III products. None of the comparable companies makes similar
    cardio or neuro devices. Limiting the comparables increases the
    percentage of profits allocated from Medtronic US from 8% to 12%. We
    conclude that a 12% allocation is unreasonable for the same reasons that
    we did in Medtronic I. See Medtronic I, at *116–18.
    Heimert raised concerns that limiting the comparison to only one
    comparable, such as Pacesetter, on the basis of function puts aside other
    differences such as distribution. He further testified that by adjusting
    the ROA the royalty rate changes. A higher ROA results in a lower
    royalty rate, and vice versa, a lower ROA results in a higher royalty rate.
    Heimert testified that a possible way to adjust the profits would
    be to restrict the set of comparables. He also testified that an
    adjustment for product liability would increase the ROA. Even though
    he believes that the Pacesetter agreement was not a reliable CUT,
    another solution would be to look at adjustments made to the Pacesetter
    agreement.
    52
    [*52] The CUT method and the CPM both provide information that
    helps determine whether a method is the best method. The CUT method
    focuses on price, whereas the CPM focuses on profit benchmark.
    Respondent’s concerns with the CUT method are that there is not a
    sufficient level of comparability with the Pacesetter agreement.
    Petitioner argues that respondent’s CPM uses companies that differ
    fundamentally from MPROC; therefore, it fails to take into account the
    central importance of MPROC.
    Becker’s report includes a table which shows that MPROC was
    offered a license that required MPROC to perform far less work than
    Pacesetter. He explained that Pacesetter had 71% of the operating
    costs, whereas MPROC had 14.8% of the operating costs, which includes
    cost of components. He further explained that the profit potentials were
    different, with MPROC’s having a profit potential of 63.6% and the
    Pacesetter agreement’s having a profit potential of 29%. He testified
    that the royalty rates suggested by Putnam and the Court’s Opinion in
    Medtronic I were “on the right track.” His testimony addressed how to
    bridge the gap. He testified that “there’s a lot of criticism on both sides”
    and “at the end of the day, the full package of adjustments has to make
    some sense.” Becker further testified the following:
    And if he [referring to Putnam] came in and said, oh, I did
    all these adjustments and I came up with 40% or even 35%
    or even 45%, I would basically say, yeah, I don’t like Dr.
    Putnam’s logic. They—I don’t like the logic of it, but
    ultimately his answer is fine. I don’t really have much to
    say. But that’s not what happened here. So I think with
    an eye towards that, there adjustment that, as I recall, you
    have made, Dr. Putnam has made, Dr. Berneman has
    made. And some of those are not really based on true data.
    Some of them are more assumptions and estimates. But if
    you kind of look at the maximum of some of those, it may
    get you closer to this answer that you say, okay, here’s all
    the potential adjustments, we take the highest of this and
    the highest of that and see if it get us to a number that’s at
    all reasonable, and then you have, A, your Pacesetter CUT
    but you also have your CPM as the check and you sort of
    recover both ways.
    Our task is to bridge the gap and find the right adjustments that
    make sense for this specific case. The Court asked about possible
    methods including averaging the CUT and the CPM. Respondent chose
    53
    [*53] neither to comment on this suggestion nor to make any additional
    suggestions, except for a comment in respondent’s Final Supplemental
    Posttrial Brief. 11
    E.      Petitioner’s Proposed Unspecified Method
    Petitioner’s proposed unspecified method combines aspects of
    both the CUT and the CPM. The first step is to apply a modified version
    of petitioner’s CUT method and the arm’s-length wholesale royalty rate
    of 8% for the trademark license to allocate profits to Medtronic US’s
    R&D activities. Step two applies a modified version of respondent’s
    CPM to allocate profit to MPROC’s activities.
    After completing the first two steps and allocating a portion of
    profit for tax years 2005 and 2006, a portion of device and lead system
    profit remains unallocated. The third step allocates the remaining profit
    between Medtronic US and MPROC. This step differs from the CUT
    method and the CPM.
    For step one, petitioner uses the Pacesetter royalty rate to
    establish a royalty rate to allocate profits to Medtronic US for its R&D
    activities and allocates the remaining profits to MPROC. Petitioner
    uses respondent’s CPM to price MPROC’s finished device
    manufacturing activities using Heimert’s ROA to allocate the
    corresponding profit to MPROC and allocate the remaining profits to
    Medtronic US and Med USA on the basis of the arm’s-length prices for
    component manufacturing and distribution. The return to MPROC is
    reduced for profits allocated to Medtronic US and Med USA. In short
    petitioner proposes to use both the CUT method and the CPM as
    starting points to price MPROC’s and Medtronic US’s activities, then at
    step three divides the remaining profit between the two entities using
    commercial and economic evidence.
    Petitioner contends that a key aspect of its unspecified method is
    to address the higher profitability of its devices and leads compared to
    the lower profitability of Pacesetter in 1992. The first two steps of the
    unspecified method do not address profitability. Petitioner describes the
    third step as a proxy for Medtronic US’s relatively higher profitability.
    11 Respondent’s Final Supplemental Posttrial Brief includes a chart of
    wholesale royalty rates, which include a rate using the comparable profit split method
    based on the adjusted Pacesetter agreement.
    54
    [*54]              1.      Step One
    Petitioner starts with Putnam’s proposed adjustments to the
    Pacesetter agreement. In his expert report Putnam provides two
    approaches: one using the Pacesetter agreement retail royalty rate of
    7% and the other using the maximum 15% retail royalty rate included
    in the Pacesetter agreement. For calculating step one, the 7% retail
    royalty rate is used because the maximum 15% retail rate includes an
    adjustment for profitability. According to petitioner this is unnecessary
    because step three makes an adjustment for profitability.
    Putnam includes low and high ranges in his expert report. For
    the purposes of the unspecified method, the high-end range is used. The
    total retail royalty rate is 17.3%.
    Base rate                                 7.0%
    Portfolio access fee                       1.8
    Cross license                              1.0
    Know-how                                   3.0
    CRDM/Neuro avg. sub-license               4.54
    Total royalty rate 12                   17.3%
    The modified CUT royalty plus the retail rate of 5.4% for the trade
    license (wholesale royalty rate of 8%) results in an allocation of
    $674,352,148 in profits to Medtronic US for 2005 and 2006 for its R&D
    activities.
    Medtronic US profit     MPROC profit
    Unspecified method
    for TY 2005–06        for TY 2005–06
    Device and lead system profit to
    $3,333,823,544
    allocate
    Step 1: Modified CUT + trademark
    license allocates returns to                        $674,352,148             —
    Medtronic US
    12   All rates in chart are retail royalty rates.
    55
    [*55]        2.     Step Two
    Petitioner makes modifications to Heimert’s CPM analysis to
    address its concern about the book values used for MPROC’s operating
    assets. The unspecified method makes an upward adjustment to
    MPROC’s operating assets. Petitioner contends that asset intensity
    allows for a more reliable comparison of asset values and that MPROC’s
    asset intensity is too low as compared to the 14 comparables in
    Heimert’s analysis. Asset intensity is equal to operating asset value
    divided by revenue. Petitioner contends asset intensity is an important
    metric for comparing MPROC’s book asset values to those of other
    companies.
    The median asset intensity for the five companies that Heimert
    identified in his testimony is 52%, and the asset intensity percentage for
    MPROC is 13.3%. Petitioner contends that MPROC’s asset intensity is
    too low because of the book value of MPROC’s operating assets. It
    argues that its adjustments to asset intensity are supported by the
    regulations.
    One of the examples provided in the regulations of the CPM
    method allows for adjustments for asset intensity. See 
    Treas. Reg. § 1.482-5
    (e) (example 5(ii)). The example allows for each uncontrolled
    comparable’s assets to be reduced by the amount relative to sales by
    which they exceed the tested party’s accounts receivable. See 
    id.
     The
    regulations explain that it may be necessary to take into account recent
    acquisitions, leased assets, intangibles, currency fluctuations, and other
    items that may not be explicitly recorded in the financial statements of
    the tested party or uncontrolled comparable. 
    Id.
     para. (d)(6).
    Petitioner further contends that the value of operating assets that
    MPROC carries on its balance sheet has depreciated over time, and the
    book value does not reflect fair market value of the assets. It adjusted
    MPROC’s asset intensity to 52.3%. The results of the adjustment are in
    the table below.
    MPROC average                 Adjusted average
    Year         operating assets in Dr.        operating assets with
    Heimert’s CPM               52.3% asset intensity
    2005             $393,029,644                  $1,401,712,258
    2006              424,192,500                  1,853,316,656
    56
    [*56] After making an adjustment for asset intensity, the unspecified
    method allocates to MPROC profits based on a 41.3% ROA, the average
    of ROAs for Heimert’s five companies as applied to MPROC’s adjusted
    asset base. This results in the allocation of $1,344,326,942 in profit to
    MPROC for 2005 and 2006 based on the modified CPM. The returns for
    components and distribution are subtracted from MPROC’s returns.
    The table below demonstrates these calculations.
    Medtronic US     Med USA
    MPROC profit
    Unspecified method            profit for TY   profit for TY
    for TY 2005–06
    2005–06         2005–06
    Device and lead system profit
    $3,333,823,544
    to allocate
    Step 1: modified CUT +
    trademark license allocates         $674,352,148        —                 —
    returns to Medtronic US
    Step 2(a): modified CPM
    —               —           $1,344,326,942
    allocates returns to MPROC
    Step 2(b):
    MPROC               Components       138,805,027                      −138,805,027
    payments for
    components
    and                 Distribution        —          $425,697,389       −425,697,389
    distribution
    3.       Step Three
    This final step allocates the remaining overall system profit not
    allocated in steps one and two, which is explained in the table below.
    57
    [*57]
    Medtronic US       Med USA
    MPROC profit
    Unspecified method        profit for TY     profit for TY
    for TY 2005–06
    2005–06           2005–06
    Device and lead system                         $3,333,823,544
    profit to allocate
    Step 1: modified CUT +
    trademark license allocates     $674,352,148         —                —
    returns to Medtronic US
    Step 2(a): modified CPM
    allocates returns to               —                 —          $1,344,326,942
    MPROC
    Step 2(b):     Components
    MPROC                            138,805,027         —            −138,805,027
    payments for
    components
    and            Distribution
    —             $425,697,389     −425,697,389
    distribution
    Remaining profit to be                        $1,315,144,454
    allocated
    Petitioner has two versions of its unspecified method. For both
    versions steps one and two are the same. Step three allocates the
    remaining profits to MPROC and Medtronic US. Petitioner’s first
    version allocates 65% of the remaining profit to MPROC and 35% to
    Medtronic US (65/35 allocations), resulting in 51% of the overall system
    profit being allocated to Medtronic US and Med USA and 49% to
    MPROC.
    58
    [*58]
    Medtronic US     Med USA
    Unspecified method with                                           MPROC profit
    profit for TY   profit for TY
    65/35 residual allocation                                        for TY 2005–06
    2005–06         2005–06
    Device and lead system profit
    $3,333,823,544
    to allocate
    Step 1: modified CUT +
    trademark license allocates        $674,352,148        —                 —
    returns to Medtronic US
    Step 2(a): modified CPM
    —               —           $1,344,326,942
    allocates returns to MPROC
    Step 2(b):        Components        138,805,027        —             −138,805,027
    MPROC
    payments for      Distribution
    components
    —          $425,697,389       −425,697,389
    and
    distribution
    Step 3: allocate remaining
    profit based on evidence in the     460,300,559        —              854,843,395
    record with 65/35 allocation
    Total system profit
    $1,699,155,123            $1,634,667,921
    allocated
    Petitioner’s second version is a 50–50 allocation of the remaining
    system profit between Medtronic US and MPROC. This version
    allocates approximately 57% of the system profit to Medtronic US and
    Med USA and 43% to MPROC.
    59
    [*59]
    Medtronic US
    Unspecified method with                      Med USA profit     MPROC profit
    profit for TY
    50/50 residual allocation                    for TY 2005–06    for TY 2005–06
    2005–06
    Device and lead      system
    $3,333,823,544
    profit to allocate
    Step 1: modified CUT +
    trademark license allocates    $674,352,148              —             —
    returns to Medtronic US
    Step 2(b):      Components     138,805,027               —       −138,805,027
    MPROC
    payments for
    components
    and             Distribution
    —            $425,697,389    −425,697,389
    distribution
    Step 3: allocate remaining
    profit based on evidence in
    657,572,227               —        657,572,227
    the record with 50/50
    allocation
    Total system profit
    $1,896,426,791           $1,437,396,753
    allocated
    Version one results in a wholesale royalty rate of 35.7% whereas
    version two results in a wholesale royalty rate of 40%.
    60
    [*60]
    Royalty rates for the     Unspecified method   Unspecified method
    unspecified method         65/35 allocation     50/50 allocation
    Total profit allocated to
    $1,699,155,123       $1,896,426,791
    Medtronic US + Med USA
    Expenses                           $835,807,413          $835,807,413
    Less distribution return           −$425,697,389        −$425,697,389
    Less component
    −$138,805,027        −$138,805,027
    manufacturing return
    Gross royalty payment to
    $1,970,460,120       $2,167,731,788
    Medtronic US
    Total intercompany sales         $4,511,601,171        $4,511,601,171
    Total intercompany rate
    43.7%                48.0%
    (TM + IP)
    Less trademark intercompany
    −8.0%                −8.0%
    royalty rate
    IP intercompany royalty rate           35.7%                40.0%
    Intercompany conversion rate            68%                  68%
    IP royalty rate                       24.3%                27.2%
    F.      Analysis of Petitioner’s Proposed Unspecified Method
    The regulations require that the same realistic alternatives
    analysis be performed for both specified and unspecified methods. See
    
    Treas. Reg. § 1.482-4
    (d)(1). We concluded in Medtronic I that MPROC’s
    role was “unique” and could be replaced with only “substantial time and
    costs.” Medtronic I, at *107–08. MPROC had substantial negotiating
    leverage to seek a significant portion of the system profits. Respondent
    relies upon the Court’s conclusion in Coca-Cola Co., 
    155 T.C. at 254
    .
    This case is distinguishable from Coca-Cola because the supply points
    in that case “were contract manufacturers that performed routine
    functions” and were “easily replaceable.” 
    Id.
     By contrast in Medtronic I
    we concluded that MPROC did not perform routine functions. See
    Medtronic I, at *106–12.
    61
    [*61] Respondent errs in relying on the regulations to support a
    different conclusion. In the example a U.S. company, USbond, licenses
    intellectual property (IP) to its foreign subsidiary, Eurobond. 
    Treas. Reg. § 1.482-4
    (d)(2). Eurobond uses that IP to manufacture and sell an
    industrial adhesive in Europe. 
    Id.
     The royalty rate that USbond
    charges Eurobond is $100 per ton, and Eurobond charges $550 per ton
    to unrelated buyers. 
    Id.
     In this example the $100 royalty rate is not
    arm’s length because USbond could produce and sell the product itself
    for a profit. 
    Id.
    Respondent contends that Medtronic US can be compared to
    USbond and that Medtronic US could have stopped using MPROC and
    instead manufactured the devices and leads. We have already ruled out
    this alternative as being nonviable. See Medtronic I, at *106–08. We
    remain with our original conclusion that MPROC could not be easily
    replaced.
    In Medtronic I respondent made the same argument that MPROC
    was easily replaceable because it performed standard manufacturing
    activities expected of any manufacturer in the medical device industry.
    As an example respondent points to petitioner’s Swiss facility. The
    Swiss facility only made devices and could not make enough devices to
    supply both Europe and the United States. Petitioner never considered
    outsourcing the activities performed by MPROC because of concerns
    about quality. Respondent has not provided evidence that disproves our
    initial conclusion that MPROC could not be replaced without
    substantial time and costs. See 
    id.
    As the royalty rate decreases, the profits to Medtronic US
    decrease. The overall profit split refers to a split of profit when
    considering the revenues and costs from all of the intercompany
    transactions involved in Medtronic US’s CRDM and Neuro businesses:
    component manufacturing, distribution, finished manufacturing, and
    R&D (technology and trademark IP). The R&D/MPROC profit refers to
    the split of profits between MPROC’s functions and Medtronic US’s R&D
    (technology and trademark IP). This profit split subset does not include
    the allocation of profits with respect to manufacturing and distribution.
    The allocation of the remaining profits in step three is a way to
    adjust the royalty rates without having to make further adjustments to
    the CUT. We examine each step of petitioner’s proposed unspecified
    method.
    62
    [*62]        1.     Step One
    Petitioner’s expert witness Hubbard testified that by using
    Putnam’s high-end range, 62%–64% of the profit goes to MPROC and
    36%–38% goes to Medtronic US. He thought these profits splits were
    reasonable. Petitioner relies upon Hubbard’s testimony to support its
    proposed unspecified method.
    Respondent contends that a 17.3% retail royalty rate should not
    be used in step one of petitioner’s proposed unspecified method.
    Respondent’s position is that the rate is too low and does not adjust for
    all the differences between the MPROC licenses and the Pacesetter
    agreement. Petitioner contends that the 17.3% rate intentionally
    excludes any adjustment for differences in profitability to isolate and
    address differences in profitability in step three. We agree with
    petitioner that profits should not be addressed in step one because they
    are instead addressed in step three.
    Petitioner further argues that the adjustments to royalty rates
    made in step one are not items that would materially alter the relative
    split between Medtronic US and MPROC. Petitioner makes the
    following arguments regarding each of the adjustments to the
    Pacesetter retail royalty rate. First, the portfolio access fee of 1.8% is
    accounted for in the early years of the Pacesetter agreement. Second,
    the 1% cross-license adjustment does not affect higher profitability.
    Third, know-how is properly accounted for with a 3% adjustment.
    Fourth, the CRDM/Neuro sublicense adjustment of 4.5% is for a
    mechanical passthrough of 4.5% of fixed royalties that does not affect
    the profit split in step three.
    In Medtronic I we made an adjustment of 7% for know-how. See
    Medtronic I, at *137. Putnam reduced that adjustment 4%. We are not
    convinced that petitioner’s adjustment is high enough.
    Respondent argues that the intellectual property under the
    MPROC licenses is the “crown jewels.” We agree that these were
    important patents in the cardio and Neuro industries; however, we do
    not agree with respondent that these patents are crown jewels.
    Petitioner had licenses with competitors for similar products.
    Pacesetter, St. Jude, Guidant, and CPI/Eli Lilly all had access to these
    patents and were not as profitable as Medtronic US. No patents were
    identified as key patents under the Pacesetter agreement.
    63
    [*63]        2.     Step Two
    We agree with petitioner that an adjustment to asset intensity is
    necessary because Heimert’s comparable companies perform functions,
    have capabilities, and own assets that differ from MPROC’s. See id.
    at *110. By increasing MPROC’s asset intensity to make it more
    comparable to the selected five companies, the comparison of MPROC
    and the five companies is easier to make; but the evidence does not
    support petitioner’s proposed adjustment which increased asset
    intensity from 13.3% to 52.3%.
    Respondent contends that petitioner’s inflating MPROC’s
    operating assets results in a lower allocation to Medtronic US. By
    increasing asset intensity to 52.3%, petitioner adjusts MPROC’s
    operation assets by over $1 billion for each year. We disagree with
    petitioner that depreciation and acquisitions justify this increase. We
    agree with respondent’s concerns that MPROC’s revenues are inflated
    because they include sales attributable to contributions by Medtronic
    US and MPROC.
    Respondent argues that MPROC should have a lower asset
    intensity than the comparables because MPROC performs fewer
    activities. Pacesetter’s asset intensity of 45.6% is higher than MPROC’s,
    which is expected because of the different functions that they performed.
    Heimert’s five comparables used in the modified CPM have asset
    intensities between 40% and 80%. We agree that the comparables
    perform more activities than MPROC, but this does not alleviate our
    concern about the comparability of Heimert’s five comparables.
    3.     Step Three
    Respondent criticizes petitioner’s proposed unspecified method
    for using a 17.3% royalty rate in step one and a 7% royalty rate in step
    three. According to respondent, petitioner uses the 7% Pacesetter
    royalty rate for determining the residual profit split. Petitioner
    disagrees with respondent.
    Petitioner contends that in step three it relies upon the Pacesetter
    agreement to split Pacesetter’s profits under the Pacesetter agreement,
    which had a 7% retail royalty rate. According to petitioner, step three
    does not use the 7% royalty rate as respondent contends. Rather,
    petitioner uses the 7% royalty rate as part of the evidence to determine
    how Medtronic US and Pacesetter split profits as licensor and licensee
    of technology used in class III implantable medical devices. For step
    64
    [*64] three petitioner wanted to look at how commercial parties with
    comparable negotiating levels split a given pool of profit.
    Petitioner contends that step three does not require a different
    profit split from that under the Pacesetter agreement because MPROC
    also licensed other nonpatent rights such as know-how, which is
    compensated by an adjustment in step one. According to petitioner, step
    three looks at how arm’s-length parties would split the remaining profit
    after allocations in steps one and two. Petitioner looked at the portion
    of Pacesetter’ s profit that Medtronic US expected to receive as a
    licensor.
    According to Robert Pindyck, an expert for petitioner in the prior
    trial, 22%–23% of the profits went to Medtronic US and 77%–78% of the
    profits went to Pacesetter. Petitioner contends that step three is focused
    on the Medtronic US/Pacesetter profit split for insight into how
    Medtronic US and MPROC, acting at arm’s length, would divide the
    additional profit remaining after steps one and two. In other words
    petitioner believes that step three should be determined by looking at
    how arm’s-length commercial actors split the profits arising from the
    license of technology used in class III implantable medical devices.
    According to petitioner step three relies upon this profit split rather
    than the royalty rate.
    Respondent is critical of step three and believes it has the same
    problems as the CUT. Respondent has the same concerns that it had in
    Medtronic I and argues that the Pacesetter agreement and the MPROC
    licenses do not have the same degree of comparability as required by the
    regulations. See 
    Treas. Reg. § 1.482-1
    (d)(3)(ii)(A).
    G.     Conclusion
    Respondent contends that petitioner’s proposed unspecified
    method is not commensurate with income as required under section 482
    and Treasury Regulation § 1.482-4(a). Respondent’s position is that
    Putnam’s CUT “flunks the similar profit potential requirement,”
    resulting in Medtronic US’s royalty income from the licensed intangible
    not being commensurate with income. We agree with respondent that
    under petitioner’s proposed unspecified method Medtronic US’s royalty
    rate is not commensurate with income.
    65
    [*65] H.     Adjustments to Achieve Royalty Rate
    Respondent contends that petitioner’s proposed unspecified
    method “bridges no gaps” between respondent’s CPM and petitioner’s
    CUT method. Petitioner provides a method which enables the Court to
    move in the right direction. Respondent provides no suggestion for
    realistically bridging the gap. Even though we are rejecting petitioner’s
    unspecified method as proposed, we will rely upon petitioner’s
    methodology as setting forth a framework for determining the royalty
    rate for devices and leads.
    As we have discussed, petitioner’s proposed unspecified method
    is not perfect. Adjustments need to be made to account for the
    inadequacy of the CUT method. The major concerns with the CUT
    method are that there (1) is only one comparable, (2) are too many
    adjustments, and (3) are inadequate adjustments for profit potential.
    Petitioner makes an attempt to address these concerns, but its proposed
    unspecified method falls short, and the results do not bridge the gap
    adequately.
    We can start by determining whether a separate rate is needed
    for devices and leads and whether it should be adjusted every year. We
    previously reached the conclusion that there can be a single royalty rate
    which does not need to be adjusted every year.
    We agree with petitioner that Putnam’s high-end range of a 17%
    retail royalty can be a starting point. There are not too many
    adjustments made to reach the 17% rate because we are not relying on
    petitioner’s proposed method as a CUT method. The adjustments
    increase the starting retail royalty rate of 7% by 10 percentage points,
    and 4.5 are from sublicenses in which the royalty rate is being passed
    through. We differ with the amount of adjustment for know-how. In
    Medtronic I, at *135, we acknowledged that MPROC had access to the
    know-how of Medtronic US. Pacesetter and its successor St. Jude did
    not have an ongoing relationship with Medtronic US. Id.
    During the prior trial petitioner’s expert Berneman testified that
    the Pacesetter agreement was the best comparable because it “deals
    with the same patents, the same market, the same product, in the same
    timeframe for the same customers, and the same profit potential.” Id.
    at *133. The Pacesetter agreement is not ideal, but it is an appropriate
    starting point.
    66
    [*66] Petitioner’s unspecified method can be used to address prices and
    profits. No adjustments need to be made to the first two steps. Putnam’s
    royalty rate is not perfect, but further adjustments would be too
    speculative. The second step made too high an adjustment for MPROC’s
    asset intensity.    From the expert testimony, we have difficulty
    pinpointing what adjustments should be made.
    The third step can be adjusted. As petitioner demonstrates with
    its two versions of the proposed unspecified method, the allocation of the
    profits between Medtronic US and MPROC can be adjusted and affect
    the royalty rate. By allocating more of the remaining profits in step
    three to Medtronic US, a higher royalty rate can be achieved. Step three
    is calculated using yearly data so the royalty rate does not need to be
    adjusted yearly.
    After taking into account both parties’ experts’ testimonies, we
    concluded that neither party put forth the best method. Our solution
    may not be perfect, but it reflects a detailed analysis in the context of
    the Eighth Circuit’s mandate and takes into consideration the level of
    technology that is needed to make safely the devices and leads. It is not
    an attempt to create a new method which is simply a hybrid of the CUT
    method and the CPM. If respondent had provided a way to make further
    modifications to the CPM, we would have considered that approach.
    The only adjustment that we are making is in step three by
    changing the allocation of the remaining profits to Medtronic US and
    MPROC. In Medtronic II the Eighth Circuit raised concerns that the
    Court did not evaluate how the different treatment of intangibles affects
    comparability. By making an adjustment, we account for know-how and
    other items that may be directly or indirectly related to the patents
    licensed to MPROC. See Medtronic II, 900 F.3d at 615.
    Even though we do not make an adjustment to step two, we
    believe that petitioner made too high an adjustment to MPROC’s ROA.
    This adjustment resulted in a greater allocation of profit in step two to
    MPROC than to Medtronic US. By making a greater allocation of the
    remaining profits in step three to Medtronic US than to MPROC, we can
    address our concerns pertaining to step two.
    Our adjustment to the third step increases the allocation of
    remaining profits to Medtronic US. It results in an allocation of 80% to
    Medtronic US and 20% to MPROC (80–20 allocation). This adjustment
    is a way of accounting for the imperfections of the CUT method, such as
    67
    [*67] “know-how,” having only one comparable, and differences in profit
    potential, and imperfections of the CPM, such as the inadequacy of the
    comparables and an unrealistic profit allocation to MPROC.
    Additionally, the adjustment takes into account petitioner’s
    unsupported increase in asset intensity in step two.
    Changing the allocation to 80–20 results in a wholesale royalty
    rate of 48.8%.
    Medtronic US     Med USA
    Unspecified method with                                           MPROC profit
    profit for TY   profit for TY
    80/20 residual allocation                                        for TY 2005–06
    2005–06         2005–06
    Device and lead system profit
    $3,333,823,544
    to allocate
    Step 1: modified CUT +
    trademark license allocates      $674,352,148        —                 —
    returns to Medtronic US
    Step 2(a): modified CPM
    —               —           $1,344,326,942
    allocates returns to MPROC
    Step 2(b):       Components       138,805,027        —             −138,805,027
    MPROC
    payments for     Distribution
    components
    —          $425,697,389       −425,697,389
    and
    distribution
    Step 3: allocate remaining
    profit based on evidence in
    1,052,115,563        —              263,028,891
    the record with 80–20
    allocation
    Total system profit
    $2,290,970,127            $1,042,853,417
    allocated
    68
    [*68]
    Royalty rates for the unspecified method             Unspecified method—80/20
    allocation
    Total profit allocated to Medtronic US +
    $2,290,970,1277
    Med USA
    Expenses                                                     $835,807,413
    Less distribution return                                    −$425,697,389
    Less component manufacturing return                         −$138,805,027
    Gross royalty payment to Medtronic US                       $2,562,275,124
    Total intercompany sales                                   $4,511,601,171
    Total intercompany rate (TM + IP)                              56.8%
    Less trademark intercompany royalty rate                        −8.0%
    IP intercompany royalty rate                                    48.8%
    Intercompany conversion rate                                     68%
    IP royalty rate                                                33.2%
    Overall profit split
    Medtronic US                                                    68.72%
    MPROC                                                           31.28%
    R&D profit split
    Medtronic US                                                    62.34%
    MPROC                                                           37.66%
    Increasing the wholesale royalty rate to 48.8% results in an
    overall profit split of 68.72% to Medtronic US/Med USA and 31.28%
    profit split to MPROC and a R&D profits split of 62.34% to Medtronic
    US and 37.66% to MPROC. The resulting profit split reflects the
    importance of the patents as well as the role played by MPROC. The
    profit split is more reasonable than the profit split of 56.8% to Medtronic
    US/Med USA and 43.2% to MPROC resulting from petitioner’s
    unspecified method with a 50–50 allocation. According to respondent’s
    69
    [*69] expert Becker, MPROC had incurred costs of 14.8% of retail prices.
    The evidence does not support a profit split which allocates 43.2% of the
    profits to MPROC when it has only 14.8% of the operating cost.
    The table below shows our resulting wholesale royalty rate of
    48.8% in comparison with the wholesale royalty rates under other
    methods, along with the resulting allocation of profits.
    [*70]       Putnam
    Berneman    MDT
    Putnam
    Unspecified       Tax Court              Unspecified   Unspecified   Modified   Pacesetter   Heimert
    CUT                             CUT                                      MOU
    CUT      petition              (35–65)         (Medtronic I)            (50–50)       (80–20)       CPM        CPSM         CPM
    (low)                          (high)
    Wholesale
    royalty    21.8%     25.0%     25.2%      33.1%       35.7%             38.0%        39.1%     40.0%         48.8%       62.2%       62.4%       66.7%
    rate
    Overall profit split
    Medtronic
    US/Med     32.2%     36.5%     36.8%      47.5%       51.0%             54.1%        55.6%     56.8%         68.7%       86.9%       87.1%       93.0%
    USA
    70
    MPROC       67.8%     63.5%     63.2%      52.5%       49.0%             45.9%        44.4%     43.2%         31.3%       13.1%       12.9%        7.0%
    R&D/MPROC profit split
    Medtronic
    18.4%     23.6%     23.9%      36.8%       41.0%             44.8%        46.6%     48.0%         62.4%       84.2%       84.5%       91.5%
    US
    MPROC      81.6%     76.4%     76.1%      63.2%       59.0%             55.2%        53.4%     52.0%         37.6%       15.8%       15.5%        8.5%
    71
    [*71] We conclude that wholesale royalty rate is 48.8% for both leads
    and devices, and the royalty rate is the same for both years in issue.
    According to the regulations an unspecified method will not be
    applied unless it provides the most reliable measure of an arm’s-length
    result under the principles of the best method rule. 
    Treas. Reg. § 1.482
    -
    4(d). Under the best method rule, the arm’s-length result of a controlled
    transaction must be determined under the method that, under the facts
    and circumstances, provides the most reliable method of getting an
    arm’s-length result. 
    Id.
     § 1.482-1(c)(1). We have concluded previously
    that petitioner’s CUT method, petitioner’s proposed unspecified method,
    the Court’s adjusted CUT method in Medtronic I, respondent’s CPM,
    and respondent’s modified CPM do not result in an arm’s-length royalty
    rate and are not the best method. Only petitioner suggested a new
    method, its proposed unspecified method; however, for reasons
    previously explained, that method needed adjustment for the result to
    be arm’s length.
    In transfer pricing cases it is not unique for the Court to be
    required to determine the proper transfer pricing method. See Perkin-
    Elmer Corp. & Subs. v. Commissioner, 
    T.C. Memo. 1993-414
     (requiring
    the Court to find a middle ground without sufficient help from the
    parties).   During further trial and posttrial briefs we received
    suggestions from the parties and their expert witnesses.         Our
    adjustments are premised upon the regulations and expert witness
    testimonies.
    As respondent’s expert witness Becker suggested, our
    adjustments start with a maximum rate.           Petitioner’s proposed
    unspecified method starts with a rate of 17.3%, which we do not adjust.
    Including an aspect of the CUT method enables R&D activity to be
    priced. Including an aspect of the CPM in the unspecified method
    enables finished device manufacturing to be priced.
    Our adjustments consider that the MPROC licenses are valuable
    and earn higher profits than the licenses covered by the Pacesetter
    agreement. We also looked at the ROA in the Heimert analysis and from
    the evidence cannot determine what the proper ROA should be. The
    criticisms each party had of the other’s methods were factored into our
    adjustment. Respondent’s expert Becker testified that you may not like
    the logic of a method but ultimately the answer is fine. Because neither
    petitioner’s proposed CUT method nor respondent’s modified CPM was
    the best method, our goal was to find the right answer. The facts in this
    72
    [*72] case are unique because of the complexity of the devices and leads,
    and we believe that our adjustment is necessary for us to bridge the gap
    between the parties’ methods.
    A wholesale royalty rate of 48.8% for both devices significantly
    bridges the gap between the parties. Petitioner’s expert witness Putnam
    proposed a CUT which resulted in a blended wholesale royalty rate of
    21.8%; whereas respondent’s expert Heimert’s original CPM analysis
    resulted in a blended wholesale royalty rate of 67.7%. In Medtronic I we
    concluded that the blended wholesale royalty rate was 38%, and after
    further trial, we conclude that the wholesale royalty rate is 48.8%, which
    we believe is the right answer.
    V.    Swiss Supply Agreement
    Medtronic Europe is a wholly owned, second tier subsidiary of
    Medtronic US. Medtronic US, MPROC, and Medtronic Europe entered
    into a supply agreement (Swiss Supply Agreement) in which Medtronic
    Europe agreed to assist MPROC by manufacturing and supplying the
    U.S. markets with devices necessary to meet customer demand.
    Medtronic Europe agreed to pay Medtronic US directly an amount equal
    to the royalties that MPROC would have paid if it had manufactured
    the devices itself and made the sale to Med USA itself.
    Respondent increased the amount owed by Medtronic Europe to
    Medtronic US under the Swiss Supply Agreement. We concluded in
    Medtronic I, at *139, that the issue should be resolved in the same
    manner as the section 482 issue regarding devices; therefore, the
    wholesale royalty is 48.8% for devices covered by the Swiss Supply
    Agreement.
    Any contentions we have not addressed are irrelevant, moot, or
    meritless.
    To reflect the foregoing,
    Decision will be entered under Rule 155.
    73
    [*73]                           APPENDIX
    Petitioner’s Expert Witnesses
    1. Richard Cohen
    Dr. Cohen is the Whitaker Professor in Biomedical Engineering
    at the Massachusetts Institute of Technology’s (MIT) Institute of
    Medical Engineering and the Harvard-MIT Health Sciences and
    Technology Program. He received his M.D. degree from Harvard
    Medical School and Ph.D. degree in physics from MIT. The Court
    recognized Dr. Cohen as an expert in the medical device industry.
    2. Glenn Hubbard
    Dr. Hubbard is the Russell L. Carson Professor in Economics and
    Finance in the Graduate School of Business of Columbia University. He
    is also a professor of economics in the Department of Economics of the
    Faculty of Arts and Sciences at Columbia University. From 2007 to 2017
    he was an adviser to the president of the Federal Reserve Bank of New
    York. From 2001 to 2003, he served as Chairman of the President’s
    Council of Economic Advisers. He received B.A. and B.S. degrees in
    economics from the University of Central Florida and A.M. and Ph.D.
    degrees in economics from Harvard University. The Court recognized
    Dr. Hubbard as an expert in financial economics.
    3. Fred McCoy
    Mr. McCoy is president and chief executive officer (CEO) of
    NeuroTronik Limited. He received his B.S. degree in business
    administration from the University of North Carolina and his M.B.A.
    degree from the Kellogg School of Management at Northwestern
    University. The Court recognized Mr. McCoy as an expert in the
    medical device industry.
    4. Jonathan Putnam
    Dr. Putnam is the founder and principal of Competition
    Dynamics, Inc., a litigation and management consulting firm. He has
    taught at the University of Toronto, Boston University, Columbia
    University, Yale University, and Vassar College. He received B.A.,
    M.A., and Ph.D. degrees in economics from Yale University. The Court
    recognized Dr. Putnam as an expert in the economics of intellectual
    property.
    74
    [*74] 5. Christopher Spadea
    Mr. Spadea is a senior consultant with Ankura Consulting Group,
    LLC, in the intellectual property practice. He is a certified licensing
    professional. He received a B.S.B.A. degree in finance from the
    University of Delaware. The Court recognized Mr. Spadea as an expert
    in licensing and intellectual property valuation.
    Respondent’s Expert Witnesses
    1. Brian Becker
    Dr. Becker is president of Precision Economics, LLC. He has
    taught at John Hopkins University, Marymount University, and George
    Washington University.      He received a B.A. degree in applied
    mathematics and economics from Johns Hopkins University and M.A.
    and Ph.D. degrees in applied economics from the Wharton School of the
    University of Pennsylvania. The Court recognized Dr. Becker as an
    expert in economics with specialization in transfer pricing.
    2. Iain Cockburn
    Dr. Cockburn is chair of the Strategy and Innovation Department
    of the Questrom School Business of Boston University. He has also
    taught at the University of British Columbia and has been a visiting
    scholar in the Department of Economics at Harvard University. He
    received a B.S. degree in economics from Queen Mary College,
    University of London, and A.M. and Ph.D. degrees in economics from
    Harvard University. The Court recognized Dr. Cockburn as an expert
    in the economics of innovation and intellectual property.
    3. Peter Crosby
    Mr. Crosby has been the CEO of six medical device companies in
    four countries. He is CEO and managing partner of Biomedical
    Business Resources, LLC. He received a B.A. degree in electrical
    engineering and an M.A. degree in biomedical engineering from the
    University of Melbourne, Australia. The Court recognized Mr. Crosby
    as an expert in the medical device industry.
    75
    [*75] 4. A. Michael Heimert
    Dr. Heimert is a senior adviser to Duff & Phelps, providing
    transfer pricing advisory services. He was a professor at Benedictine
    University. He received a B.S. degree in business economics from
    Marquette University and M.A. and Ph.D. degrees in economics from
    the University of Wisconsin–Milwaukee.        The Court recognized
    Dr. Heimert as an expert in economics and transfer pricing.
    5. Christine Meyer
    Dr. Meyer is an economist and managing director and the chair
    of the intellectual property practice at National Economic Research
    Associates, Inc. She taught statistics and economics at Bentley College
    and Colgate University. She received a B.A. degree with a concentration
    in economics from the U.S. Military Academy and a Ph.D. degree in
    economics from MIT. The Court recognized Dr. Meyer as an expert in
    applied microeconomics and in the economic analysis of licenses,
    patents, and other intellectual property.